SCOPe 2.08: Domain d3gnxe_: 3gnx E:

Lineage for d3gnxe_ (3gnx E:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.15: Xylose isomerase-like [51658] (8 families)
   different families share similar but non-identical metal-binding sites

5. Family c.1.15.3: Xylose isomerase [51665] (2 proteins)

6. Protein automated matches [190298] (3 species)
   not a true protein

7. Species Streptomyces rubiginosus [TaxId:1929] [187248] (20 PDB entries)

8. Domain d3gnxe_: 3gnx E: [176788]
   automated match to d1clka_
   complexed with mn, xyl

Details for d3gnxe_

PDB Entry: 3gnx, 2 Å

PDB Description: structure of dehydrated d-xylose isomerase from streptomyces rubiginosus

PDB Compounds: (E:) xylose isomerase

SCOPe Domain Sequences for d3gnxe_:

Sequence; same for both SEQRES and ATOM records:

>d3gnxe_ c.1.15.3 (E:) automated matches {Streptomyces rubiginosus [TaxId: 1929]}
yqptpedrftfglwtvgwqgrdpfgdatrraldpvesvqrlaelgahgvtfhdddlipfg
ssdsereehvkrfrqalddtgmkvpmattnlfthpvfkdggftandrdvrryalrktirn
idlavelgaetyvawggregaesggakdvrdaldrmkeafdllgeyvtsqgydirfaiep
kpneprgdillptvghalafierlerpelygvnpevgheqmaglnfphgiaqalwagklf
hidlngqngikydqdlrfgagdlraafwlvdllesagysgprhfdfkpprtedfdgvwas
aagcmrnylilkeraaafradpevqealrasrldelarptaadglqallddrsafeefdv
daaaargmaferldqlamdhllgar

Timeline for d3gnxe_:

• d3gnxe_ first appeared in SCOPe 2.01
  
• d3gnxe_ appears in SCOPe 2.07