SCOPe 2.07: Domain d1yuya_: 1yuy A:

Lineage for d1yuya_ (1yuy A:)

1. Root: SCOPe 2.07

2. Class e: Multi-domain proteins (alpha and beta) [56572] (71 folds)

3. Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
   divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members

4. Superfamily e.8.1: DNA/RNA polymerases [56672] (8 families)
   "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain

5. Family e.8.1.4: RNA-dependent RNA-polymerase [56694] (3 proteins)

6. Protein automated matches [190260] (25 species)
   not a true protein

7. Species Hepatitis C virus [TaxId:11103] [187048] (44 PDB entries)

8. Domain d1yuya_: 1yuy A: [162306]
   automated match to d1nb4a_
   complexed with so4

Details for d1yuya_

PDB Entry: 1yuy, 1.9 Å

PDB Description: hepatitis c virus ns5b rna-dependent rna polymerase genotype 2a

PDB Compounds: (A:) RNA-dependent RNA polymerase

SCOPe Domain Sequences for d1yuya_:

Sequence, based on SEQRES records:

>d1yuya_ e.8.1.4 (A:) automated matches {Hepatitis C virus [TaxId: 11103]}
smsyswtgalitpcspeeeklpinplsnsllryhnkvycttsksaslrakkvtfdrmqvl
dayydsvlkdiklaaskvsarlltleeacqltpphsarskygfgakevrslsgravnhik
svwkdlledsqtpipttimaknevfcvdptkggkkaarlivypdlgvrvcekmalydvtq
klpqavmgasygfqyspaqrvefllkawaekkdpmgfsydtrcfdstvterdirteesiy
qacslpeeartaihslterlyvggpmfnskgqscgyrrcrasgvlttsmgntitcyvkal
aackaagivaptmlvcgddlvvisesqgteedernlrafteamtrysappgdpprpeydl
elitscssnvsvalgpqgrrryyltrdpttpiaraawetvrhspvnswlgniiqyaptiw
vrmvlmthffsilmaqdtldqnlnfemygsvysvspldlpaiierlhgldafslhtytph
eltrvasalrklgapplrawksraravraslisrggraavcgrylfnwavktklkltplp
earlldlsswftvgagggdiyhs

Sequence, based on observed residues (ATOM records):

>d1yuya_ e.8.1.4 (A:) automated matches {Hepatitis C virus [TaxId: 11103]}
smsyswtgalitpcspeeeklpinplsnsllryhnkvycttsksaslrakkvtfdrmqvl
dayydsvlkdiklaaskvsarlltleeacqltpphsarskygfgakevrslsgravnhik
svwkdlledsqtpipttimaknevfcvdkkaarlivypdlgvrvcekmalydvtqklpqa
vmgasygfqyspaqrvefllkawaekkdpmgfsydtrcfdstvterdirteesiyqacsl
peeartaihslterlyvggpmfnskgqscgyrrcrasgvlttsmgntitcyvkalaacka
agivaptmlvcgddlvvisesqgteedernlrafteamtrysappgdpprpeydlelits
cssnvsvalgpqgrrryyltrdpttpiaraawetvrhspvnswlgniiqyaptiwvrmvl
mthffsilmaqdtldqnlnfemygsvysvspldlpaiierlhgldafslhtytpheltrv
asalrklgapplrawksraravraslisrggraavcgrylfnwavktklkltplpearll
dlsswftvgagggdiyhs

Timeline for d1yuya_:

• d1yuya_ first appeared in SCOPe 2.01
  
• d1yuya_ appears in SCOPe 2.06
  
• d1yuya_ appears in the current release, SCOPe 2.08