SCOPe 2.05: Domain d1yk5b_: 1yk5 B:

Lineage for d1yk5b_ (1yk5 B:)

1. Root: SCOPe 2.05

2. Class g: Small proteins [56992] (92 folds)

3. Fold g.41: Rubredoxin-like [57769] (17 superfamilies)
   metal(zinc or iron)-bound fold; sequence contains two CX(n)C motifs, in most cases n = 2

4. Superfamily g.41.5: Rubredoxin-like [57802] (4 families)

5. Family g.41.5.1: Rubredoxin [57803] (5 proteins)

6. Protein Rubredoxin [57804] (8 species)

7. Species Pyrococcus abyssi [TaxId:29292] [188135] (3 PDB entries)

8. Domain d1yk5b_: 1yk5 B: [162233]
   automated match to d1bq8a_
   complexed with fe

Details for d1yk5b_

PDB Entry: 1yk5, 1.79 Å

PDB Description: Pyrococcus abyssi rubredoxin

PDB Compounds: (B:) rubredoxin

SCOPe Domain Sequences for d1yk5b_:

Sequence; same for both SEQRES and ATOM records:

>d1yk5b_ g.41.5.1 (B:) Rubredoxin {Pyrococcus abyssi [TaxId: 29292]}
makwrckicgyiydedegdpdngispgtkfedlpddwvcplcgapkseferie

Timeline for d1yk5b_:

• d1yk5b_ first appeared in SCOPe 2.01
  
• d1yk5b_ appears in SCOPe 2.04
  
• d1yk5b_ appears in SCOPe 2.06
  
• d1yk5b_ appears in the current release, SCOPe 2.08