SCOPe 2.05: Domain d1yq9i_: 1yq9 I:

Lineage for d1yq9i_ (1yq9 I:)

1. Root: SCOPe 2.05

2. Class e: Multi-domain proteins (alpha and beta) [56572] (68 folds)

3. Fold e.18: HydB/Nqo4-like [56761] (1 superfamily)
   3 domains: (1) all-alpha; (2&3) alpha+beta

4. Superfamily e.18.1: HydB/Nqo4-like [56762] (3 families)

5. Family e.18.1.1: Nickel-iron hydrogenase, large subunit [56763] (2 proteins)

6. Protein automated matches [190109] (8 species)
   not a true protein

7. Species Desulfovibrio gigas [TaxId:879] [188148] (1 PDB entry)

8. Domain d1yq9i_: 1yq9 I: [144717]
   Other proteins in same PDB: d1yq9a_, d1yq9b_, d1yq9h1
   automated match to d1frvb_
   complexed with f3s, fco, gol, h2s, mg, ni, per, sf4

Details for d1yq9i_

PDB Entry: 1yq9, 2.35 Å

PDB Description: structure of the unready oxidized form of [nife] hydrogenase

PDB Compounds: (I:) Periplasmic [NiFe] hydrogenase Large subunit

SCOPe Domain Sequences for d1yq9i_:

Sequence; same for both SEQRES and ATOM records:

>d1yq9i_ e.18.1.1 (I:) automated matches {Desulfovibrio gigas [TaxId: 879]}
nkivvdpitrieghlrieveveggkiknawsmstlfrglemilkgrdprdaqhftqracg
vctyvhalasvravdncvgvkipenatlmrnltmgaqymhdhlvhfyhlhaldwvnvana
lnadpakaarlandlsprkttteslkavqakvkalvesgqlgiftnayflgghpayvlpa
evdliatahylealrvqvkaaramaifgaknphtqftvvggctnydslrperiaefrkly
kevrefieqvyitdllavagfyknwagigktsnfltcgefptdeydlnsrytpqgviwgn
dlskvddfnpdlieehvkyswyegadahhpykgvtkpkwtefhgedryswmkaprykgea
fevgplasvlvayakkheptvkavdlvlktlgvgpealfstlgrtaargiqcltaaqeve
vwldkleanvkagkddlytdwqyptesqgvgfvnaprgmlshwivqrggkienfqlvvps
twnlgprcaegklsaveqaligtpiadpkrpveilrtvhsydpciacgvh

Timeline for d1yq9i_:

• d1yq9i_ first appeared in SCOP 1.75, called d1yq9i1
  
• d1yq9i_ appears in SCOPe 2.04
  
• d1yq9i_ appears in SCOPe 2.06
  
• d1yq9i_ appears in the current release, SCOPe 2.08