SCOPe 2.06: Domain d2j9qa2: 2j9q A:315-639

Lineage for d2j9qa2 (2j9q A:315-639)

1. Root: SCOPe 2.06

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.118: alpha-alpha superhelix [48370] (25 superfamilies)
   multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix

4. Superfamily a.118.8: TPR-like [48452] (9 families)

5. Family a.118.8.1: Tetratricopeptide repeat (TPR) [48453] (20 proteins)
   this is a repeat family; one repeat unit is 1zb1 A:166-231 found in domain

6. Protein automated matches [190103] (4 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [186825] (11 PDB entries)

8. Domain d2j9qa2: 2j9q A:315-639 [138152]
   Other proteins in same PDB: d2j9qa3
   automated match to d1fcha_
   complexed with sr

Details for d2j9qa2

PDB Entry: 2j9q, 2.65 Å

PDB Description: a novel conformation for the tpr domain of pex5p

PDB Compounds: (A:) peroxisomal targeting signal 1 receptor

SCOPe Domain Sequences for d2j9qa2:

Sequence, based on SEQRES records:

>d2j9qa2 a.118.8.1 (A:315-639) automated matches {Human (Homo sapiens) [TaxId: 9606]}
ltsatydkgyqfeeenplrdhpqpfeeglrrlqegdlpnavllfeaavqqdpkhmeawqy
lgttqaeneqellaisalrrclelkpdnqtalmalavsftneslqrqaceilrdwlrytp
ayahlvtpaeegaggaglgpskrilgsllsdslflevkelflaavrldptsidpdvqcgl
gvlfnlsgeydkavdcftaalsvrpndyllwnklgatlangnqseeavaayrralelqpg
yirsrynlgiscinlgahreavehflealnmqrksrgprgeggamseniwstlrlalsml
gqsdaygaadardlstlltmfglpq

Sequence, based on observed residues (ATOM records):

>d2j9qa2 a.118.8.1 (A:315-639) automated matches {Human (Homo sapiens) [TaxId: 9606]}
ltsatydkgyqfeeenplrdhpqpfeeglrrlqegdlpnavllfeaavqqdpkhmeawqy
lgttqaeneqellaisalrrclelkpdnqtalmalavsftneslqrqaceilrdwlrytp
ayahlvtpslflevkelflaavrldptsidpdvqcglgvlfnlsgeydkavdcftaalsv
rpndyllwnklgatlangnqseeavaayrralelqpgyirsrynlgiscinlgahreave
hflealnmqrksrggamseniwstlrlalsmlgqsdaygaadardlstlltmfglpq

Timeline for d2j9qa2:

• d2j9qa2 first appeared in SCOP 1.73, called d2j9qa1
  
• d2j9qa2 was called d2j9qa_ in SCOPe 2.05
  
• d2j9qa2 appears in SCOPe 2.07
  
• d2j9qa2 appears in the current release, SCOPe 2.08