SCOPe 2.08: Domain d2if9b2: 2if9 B:131-260

Lineage for d2if9b2 (2if9 B:131-260)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.89: Origin of replication-binding domain, RBD-like [55463] (1 superfamily)
   alpha-beta-alpha-beta(2)-alpha-beta-alpha-beta; 3 layers: a/b/a; antiparallel sheet 41325

4. Superfamily d.89.1: Origin of replication-binding domain, RBD-like [55464] (6 families)

5. Family d.89.1.1: The origin DNA-binding domain of SV40 T-antigen [55465] (2 proteins)

6. Protein The origin DNA-binding domain of SV40 T-antigen [55466] (2 species)

7. Species Simian virus 40, Sv40 [TaxId:10633] [55467] (10 PDB entries)

8. Domain d2if9b2: 2if9 B:131-260 [137328]
   Other proteins in same PDB: d2if9a3, d2if9b3
   automated match to d1tbd__

Details for d2if9b2

PDB Entry: 2if9, 2.59 Å

PDB Description: crystal structure of sv40 t-antigen origin binding domain disulfide- linked dimer

PDB Compounds: (B:) large t antigen

SCOPe Domain Sequences for d2if9b2:

Sequence; same for both SEQRES and ATOM records:

>d2if9b2 d.89.1.1 (B:131-260) The origin DNA-binding domain of SV40 T-antigen {Simian virus 40, Sv40 [TaxId: 10633]}
kvedpkdfpsellsflshavfsnrtlacfaiyttkekaallykkimekysvtfisrhnsy
nhnilffltphrhrvsainnyaqklctfsflickgvnkeylmysaltrdpfsvieeslpg
glkehdfnpe

Timeline for d2if9b2:

• d2if9b2 first appeared in SCOP 1.73, called d2if9b1
  
• d2if9b2 appears in SCOPe 2.07