SCOPe 2.07: Domain d2b4jd2: 2b4j D:347-426

Lineage for d2b4jd2 (2b4j D:347-426)

1. Root: SCOPe 2.07

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.48: N-cbl like [47667] (5 superfamilies)
   4 helices; bundle, left-handed twist; left-handed superhelix

4. Superfamily a.48.4: HIV integrase-binding domain [140576] (2 families)

5. Family a.48.4.1: HIV integrase-binding domain [140577] (2 proteins)
   N-terminal part of PfamB PB012949

6. Protein PC4 and SFRS1-interacting protein, PSIP1 [140578] (1 species)

7. Species Human (Homo sapiens) [TaxId:9606] [140579] (2 PDB entries)
   Uniprot O75475 346-426! Uniprot O75475 347-429

8. Domain d2b4jd2: 2b4j D:347-426 [127836]
   Other proteins in same PDB: d2b4ja_, d2b4jb_, d2b4jc2, d2b4jd3
   automated match to d1z9ea1
   complexed with gol, po4

Details for d2b4jd2

PDB Entry: 2b4j, 2.02 Å

PDB Description: structural basis for the recognition between hiv-1 integrase and ledgf/p75

PDB Compounds: (D:) PC4 and SFRS1 interacting protein

SCOPe Domain Sequences for d2b4jd2:

Sequence; same for both SEQRES and ATOM records:

>d2b4jd2 a.48.4.1 (D:347-426) PC4 and SFRS1-interacting protein, PSIP1 {Human (Homo sapiens) [TaxId: 9606]}
smdsrlqrihaeiknslkidnldvnrciealdelaslqvtmqqaqkhtemittlkkirrf
kvsqvimekstmlynkfknm

Timeline for d2b4jd2:

• d2b4jd2 first appeared in SCOP 1.73, called d2b4jd1
  
• d2b4jd2 appears in SCOPe 2.06
  
• d2b4jd2 appears in the current release, SCOPe 2.08