Lineage for d1v5vb2 (1v5v B:3-312)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 3008795Fold d.250: Folate-binding domain [103024] (1 superfamily)
    duplication: consists of two beta(2)-alpha-beta(3)-alpha subdomains swapped with the first strands
  4. 3008796Superfamily d.250.1: Folate-binding domain [103025] (2 families) (S)
    some topological similarity to Formylmethanofuran:tetrahydromethanopterin formyltransferase
  5. 3008797Family d.250.1.1: Aminomethyltransferase folate-binding domain [103026] (4 proteins)
  6. 3008798Protein Glycine cleavage system T protein, GcvT [111012] (4 species)
  7. 3008804Species Pyrococcus horikoshii [TaxId:53953] [117996] (1 PDB entry)
    Uniprot O58888
  8. 3008806Domain d1v5vb2: 1v5v B:3-312 [113542]
    Other proteins in same PDB: d1v5va1, d1v5vb1
    complexed with gol, peg

Details for d1v5vb2

PDB Entry: 1v5v (more details), 1.5 Å

PDB Description: Crystal Structure of a Component of Glycine Cleavage System: T-protein from Pyrococcus horikoshii OT3 at 1.5 A Resolution
PDB Compounds: (B:) Aminomethyltransferase

SCOPe Domain Sequences for d1v5vb2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1v5vb2 d.250.1.1 (B:3-312) Glycine cleavage system T protein, GcvT {Pyrococcus horikoshii [TaxId: 53953]}
qmvkrvhifdwhkeharkieefagwempiwyssikeehlavrnavgifdvshmgeivfrg
kdalkflqyvttndiskppaisgtytlvlnergaikdetlvfnmgnneylmicdsdafek
lyawftylkrtieqftkldleielktydiamfavqgpkardlakdlfgidinemwwfqar
wveldgikmllsrsgytgengfevyiedanpyhpdeskrgepekalhvwerileegkkyg
ikpcglgardtlrleagytlygnetkelqllstdidevtplqanlefaiywdkdfigkda
llkqkergvg

SCOPe Domain Coordinates for d1v5vb2:

Click to download the PDB-style file with coordinates for d1v5vb2.
(The format of our PDB-style files is described here.)

Timeline for d1v5vb2:

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Domains from same chain:
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d1v5vb1