SCOPe 2.08: Domain d1vmda1: 1vmd A:12-160

Lineage for d1vmda1 (1vmd A:12-160)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.24: Methylglyoxal synthase-like [52334] (1 superfamily)
   3 layers, a/b/a; parallel beta-sheet of 5 strands, order 32145

4. Superfamily c.24.1: Methylglyoxal synthase-like [52335] (4 families)
   contains a common phosphate-binding site

5. Family c.24.1.2: Methylglyoxal synthase, MgsA [52339] (2 proteins)

6. Protein Methylglyoxal synthase, MgsA [52340] (3 species)

7. Species Thermotoga maritima [TaxId:2336] [110489] (1 PDB entry)
   Uniprot Q9X0R7 #

8. Domain d1vmda1: 1vmd A:12-160 [108891]
   Other proteins in same PDB: d1vmda2, d1vmdb2
   Structural genomics target
   complexed with cl, so4

Details for d1vmda1

PDB Entry: 1vmd, 2.06 Å

PDB Description: Crystal structure of Methylglyoxal synthase (TM1185) from Thermotoga maritima at 2.06 A resolution

PDB Compounds: (A:) methylglyoxal synthase

SCOPe Domain Sequences for d1vmda1:

Sequence; same for both SEQRES and ATOM records:

>d1vmda1 c.24.1.2 (A:12-160) Methylglyoxal synthase, MgsA {Thermotoga maritima [TaxId: 2336]}
mdkkkrialiahdrrkrdllewvsfnlgtlskhelyatgttgallqeklglkvhrlksgp
lggdqqigamiaegkidvliffwdplepqahdvdvkaliriatvynipvaitrstadfli
ssplmndvyekiqidyeeelerrirkvve

Timeline for d1vmda1:

• d1vmda1 first appeared in SCOP 1.69, called d1vmda_
  
• d1vmda1 appears in SCOPe 2.07