Class c: Alpha and beta proteins (a/b) [51349] (148 folds) |
Fold c.116: alpha/beta knot [75216] (1 superfamily) core: 3 layers: a/b/a, parallel beta-sheet of 5 strands, order 21435; contains a deep trefoil knot |
Superfamily c.116.1: alpha/beta knot [75217] (9 families) known or predicted SAM-dependent methytransferases including the SPOUT 'sequence' superfamily all known members have dimeric structures |
Family c.116.1.4: tRNA(m1G37)-methyltransferase TrmD [89629] (2 proteins) fold and dimerisation mode are similar to those of the YbeA-like family; contains additional C-terminal all-alpha subdomain |
Protein tRNA(m1G37)-methyltransferase TrmD [89630] (3 species) |
Species Escherichia coli [TaxId:562] [110499] (1 PDB entry) Uniprot P07020 |
Domain d1p9pa_: 1p9p A: [104092] complexed with sah |
PDB Entry: 1p9p (more details), 2.5 Å
SCOPe Domain Sequences for d1p9pa_:
Sequence, based on SEQRES records: (download)
>d1p9pa_ c.116.1.4 (A:) tRNA(m1G37)-methyltransferase TrmD {Escherichia coli [TaxId: 562]} mwigiislfpemfraitdygvtgravkngllsiqswsprdfthdrhrtvddrpygggpgm lmmvqplrdaihaakaaagegakviylspqgrkldqagvselatnqklilvcgryegide rviqteideewsigdyvlsggelpamtlidsvsrfipgvlgheasatedsfaeglldcph ytrpevlegmevppvllsgnhaeirrwrlkqslgrtwlrrpellenlalteeqarllaef ktehaq
>d1p9pa_ c.116.1.4 (A:) tRNA(m1G37)-methyltransferase TrmD {Escherichia coli [TaxId: 562]} mwigiislfpemfraitdygvtgravkngllsiqswsprdfthdrhrtvddrpygggpgm lmmvqplrdaihaakaaagegakviylspqgrkldqagvselatnqklilvcgryegide rviqteideewsigdyvlsggelpamtlidsvsrfipgvlgeglldcphytrpevlegme vppvllsgnhaeirrwrlkqslgrtwlrrpellenlalteeqarllaefktehaq
Timeline for d1p9pa_: