Lineage for d1rvka1 (1rvk A:127-381)
- Root: SCOPe 2.05
Class c: Alpha and beta proteins (a/b) [51349] (148 folds) Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
the first seven superfamilies have similar phosphate-binding sites
Superfamily c.1.11: Enolase C-terminal domain-like [51604] (3 families) 
binds metal ion (magnesium or manganese) in conserved site inside barrel
N-terminal alpha+beta domain is common to this superfamily
Family c.1.11.2: D-glucarate dehydratase-like [51609] (15 proteins) 
Protein Hypothetical protein Atu3453 [102097] (1 species) Species Agrobacterium tumefaciens [TaxId:358] [102098] (1 PDB entry) 
Domain d1rvka1: 1rvk A:127-381 [97928]
Other proteins in same PDB: d1rvka2
structural genomics
complexed with mg
Details for d1rvka1
PDB Entry: 1rvk (more details), 1.7 Å
PDB Description: crystal structure of enolase agr_l_2751 from agrobacterium tumefaciens
PDB Compounds: (A:) isomerase/lactonizing enzymeSCOPe Domain Sequences for d1rvka1:
Sequence; same for both SEQRES and ATOM records: (download)
>d1rvka1 c.1.11.2 (A:127-381) Hypothetical protein Atu3453 {Agrobacterium tumefaciens [TaxId: 358]}
yrdkvlaygsimcgdelegglatpedygrfaetlvkrgykgiklhtwmppvswapdvkmd
lkacaavreavgpdirlmidafhwysrtdalalgrgleklgfdwieepmdeqslssykwl
sdnldipvvgpesaagkhwhraewikagacdilrtgvndvggitpalktmhlaeafgmec
evhgntamnlhvvaatkncrwyergllhpfleyddghdylkslsdpmdrdgfvhvpdrpg
lgedidftfidnnrv
SCOPe Domain Coordinates for d1rvka1:
Click to download the PDB-style file with coordinates for d1rvka1.
(The format of our PDB-style files is described here.)
(The format of our PDB-style files is described here.)
Timeline for d1rvka1:
- d1rvka1 first appeared in SCOP 1.67
- d1rvka1 appears in SCOPe 2.04
- d1rvka1 appears in SCOPe 2.06
- d1rvka1 appears in the current release, SCOPe 2.08
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