PDB entry 7rr0

View 7rr0 on RCSB PDB site
Description: SARS-CoV-2 receptor binding domain bound to Fab PDI 222
Class: viral protein/immune system
Keywords: Antibody, SARS-CoV-2 RBD, Complex, VIRAL PROTEIN, VIRAL PROTEIN-IMMUNE SYSTEM complex
Deposited on 2021-08-08, released 2021-10-06
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-10-27, with a file datestamp of 2021-10-22.
Experiment type: EM
Resolution: 3.12 Å
R-factor: N/A
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Spike protein S1
    Species: Severe acute respiratory syndrome coronavirus 2 [TaxId:2697049]
    Gene: S, 2
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d7rr0a_
  • Chain 'B':
    Compound: PDI 222 Fab Heavy Chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 7RR0 (0-120)
    Domains in SCOPe 2.08: d7rr0b_
  • Chain 'C':
    Compound: PDI 222 Fab Light Chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 7RR0 (0-106)
    Domains in SCOPe 2.08: d7rr0c_
  • Heterogens: NAG

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >7rr0A (A:)
nlcpfgevfnatrfasvyawnrkrisncvadysvlynsasfstfkcygvsptklndlcft
nvyadsfvirgdevrqiapgqtgkiadynyklpddftgcviawnsnnldskvggnynyly
rlfrksnlkpferdisteiyqagstpcngvegfncyfplqsygfqptngvgyqpyrvvvl
sfellhapatvcgp

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >7rr0B (B:)
qvqlvqsgpevkkpgtsvkvsckasgftfsssavqwvrqargqrlewigwivvgsgnany
aprfqervtitrdmstntaymelsslrsedtavyycaapncsrtlcydgfnmwgqgtmvt
v

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >7rr0C (C:)
eivltqspgslslspgeratlscrasqsvrssylgwyqqkpgqaprlliygassratgip
drfsgsgsetdftltisrlepedfavyycqqydsspwtfgqgtkvei