PDB entry 6ztc
View 6ztc on RCSB PDB site
Description: crystal structure of prostaglandin d2 synthase in complex with fragment 1a at 1.84a resolution.
Class: isomerase
Keywords: prostaglandin biosynthesis, fatty acid biosynthesis, prostaglandin d2 synthase, pgds, asthma, cytoplasm, isomerase, lipid synthesis
Deposited on
2020-07-17, released
2021-07-28
The last revision prior to the SCOPe 2.08 freeze date was dated
2021-07-28, with a file datestamp of
2021-07-23.
Experiment type: XRAY
Resolution: 1.84 Å
R-factor: N/A
AEROSPACI score: 0.44
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: hematopoietic prostaglandin d synthase
Species: Homo sapiens [TaxId:9606]
Gene: HPGDS, GSTS, PGDS, PTGDS2
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6ztca1, d6ztca2 - Chain 'B':
Compound: hematopoietic prostaglandin d synthase
Species: Homo sapiens [TaxId:9606]
Gene: HPGDS, GSTS, PGDS, PTGDS2
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6ztcb1, d6ztcb2, d6ztcb3 - Heterogens: QPN, GSH, MG, GOL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>6ztcA (A:)
gmpnykltyfnmrgraeiiryifayldiqyedhrieqadwpeikstlpfgkipilevdgl
tlhqslaiaryltkntdlagntemeqchvdaivdtlddfmscfpwaekkqdvkeqmfnel
ltynaphlmqdldtylggrewlignsvtwadfyweicsttllvfkpdlldnhprlvtlrk
kvqaipavanwikrrpqtkl
Sequence, based on observed residues (ATOM records): (download)
>6ztcA (A:)
mpnykltyfnmrgraeiiryifayldiqyedhrieqadwpeikstlpfgkipilevdglt
lhqslaiaryltkntdlagntemeqchvdaivdtlddfmscfpwaekkqdvkeqmfnell
tynaphlmqdldtylggrewlignsvtwadfyweicsttllvfkpdlldnhprlvtlrkk
vqaipavanwikrrpqtkl
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>6ztcB (B:)
gmpnykltyfnmrgraeiiryifayldiqyedhrieqadwpeikstlpfgkipilevdgl
tlhqslaiaryltkntdlagntemeqchvdaivdtlddfmscfpwaekkqdvkeqmfnel
ltynaphlmqdldtylggrewlignsvtwadfyweicsttllvfkpdlldnhprlvtlrk
kvqaipavanwikrrpqtkl