PDB entry 6t9c

View 6t9c on RCSB PDB site
Description: Crystal structure of the complex between PPARgamma LBD and the ligand NV1346 (3a)
Class: transcription
Keywords: transcription factor, TRANSCRIPTION
Deposited on 2019-10-27, released 2020-02-26
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-06-10, with a file datestamp of 2020-06-05.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: N/A
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Peroxisome proliferator-activated receptor gamma
    Species: Homo sapiens [TaxId:9606]
    Gene: PPARG, NR1C3
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6t9ca_
  • Chain 'B':
    Compound: Peroxisome proliferator-activated receptor gamma
    Species: Homo sapiens [TaxId:9606]
    Gene: PPARG, NR1C3
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6t9cb_
  • Heterogens: MX8, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6t9cA (A:)
mgsshhhhhhssglvprgshmaeissdidqlnpesadlralakhlydsyiksfpltkaka
railtgkttdkspfviydmnslmmgedkikfkhitplqeqskevairifqgcqfrsveav
qeiteyaksipgfvnldlndqvtllkygvheiiytmlaslmnkdgvlisegqgfmtrefl
kslrkpfgdfmepkfefavkfnalelddsdlaifiaviilsgdrpgllnvkpiediqdnl
lqalelqlklnhpessqlfakllqkmtdlrqivtehvqllqvikktetdmslhpllqeiy
kdly

    Sequence, based on observed residues (ATOM records): (download) 
    >6t9cA (A:)
esadlralakhlydsyiksfpltkakarailtgkttdkspfviydmnslmmgevairifq
gcqfrsveavqeiteyaksipgfvnldlndqvtllkygvheiiytmlaslmnkdgvlise
gqgfmtreflkslrkpfgdfmepkfefavkfnalelddsdlaifiaviilsgdrpgllnv
kpiediqdnllqalelqlklnhpessqlfakllqkmtdlrqivtehvqllqvikktetdm
slhpllqeiyk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6t9cB (B:)
mgsshhhhhhssglvprgshmaeissdidqlnpesadlralakhlydsyiksfpltkaka
railtgkttdkspfviydmnslmmgedkikfkhitplqeqskevairifqgcqfrsveav
qeiteyaksipgfvnldlndqvtllkygvheiiytmlaslmnkdgvlisegqgfmtrefl
kslrkpfgdfmepkfefavkfnalelddsdlaifiaviilsgdrpgllnvkpiediqdnl
lqalelqlklnhpessqlfakllqkmtdlrqivtehvqllqvikktetdmslhpllqeiy
kdly

    Sequence, based on observed residues (ATOM records): (download) 
    >6t9cB (B:)
esadlralakhlydsyiksfpltkakarailtgkttdkspfviydmnslmmevairifqg
cqfrsveavqeiteyaksipgfvnldlndqvtllkygvheiiytmlaslmnkdgvliseg
qgfmtreflkslkpfgdfmepkfefavkfnalelddsdlaifiaviilsgdrpgllnvkp
iediqdnllqalelqlklnhpessqlfakllqkmtdlrqivtehvqllqvikktetdmsl
hpllqeiy