PDB entry 6n4f

View 6n4f on RCSB PDB site
Description: The crystal structure of hemagglutinin from A/canine/IL/11613/2015 (H3N2) influenza virus.
Class: viral protein
Keywords: Hemagglutinin, canine influenza virus, VIRAL PROTEIN
Deposited on 2018-11-19, released 2019-01-30
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-01-30, with a file datestamp of 2019-01-25.
Experiment type: XRAY
Resolution: 3.01 Å
R-factor: N/A
AEROSPACI score: 0.13 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: hemagglutinin HA1
    Species: unidentified influenza virus [TaxId:11309]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6n4fa_
  • Chain 'B':
    Compound: hemagglutinin HA2
    Species: unidentified influenza virus [TaxId:11309]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6n4fb_
  • Chain 'C':
    Compound: hemagglutinin HA1
    Species: unidentified influenza virus [TaxId:11309]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6n4fc_
  • Chain 'D':
    Compound: hemagglutinin HA2
    Species: unidentified influenza virus [TaxId:11309]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6n4fd_
  • Chain 'E':
    Compound: hemagglutinin HA1
    Species: unidentified influenza virus [TaxId:11309]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6n4fe_
  • Chain 'F':
    Compound: hemagglutinin HA2
    Species: unidentified influenza virus [TaxId:11309]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6n4ff_
  • Chain 'G':
    Compound: hemagglutinin HA1
    Species: unidentified influenza virus [TaxId:11309]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6n4fg_
  • Chain 'H':
    Compound: hemagglutinin HA2
    Species: unidentified influenza virus [TaxId:11309]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6n4fh_

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6n4fA (A:)
adlgsqnllgnennaatlclghhavpngtmvktitddqievtnatelvqnsstgkicnnp
hkildgrdctlidallgdphcdvfqnetwdlfversnafsncypydvpdyaslrsivass
gtlefitegftwagvtqnggsgackrgpansffsrlnwltksgntypvlnvtmpnnnnfd
klyiwgvhhpstnqeqtslyiqasgrvtvstrrsqqtiipnigsrplvrgqsgrisvywt
ivkpgdilvinsngnliaprgyfkmhigkssimrsdapidtcisecitpngsipnekpfq
nvnkitygacpkyvkqntlklatgmrnvperqtr

    Sequence, based on observed residues (ATOM records): (download) 
    >6n4fA (A:)
nnaatlclghhavpngtmvktitddqievtnatelvqnsstgkicnnphkildgrdctli
dallgdphcdvfqnetwdlfversnafsncypydvpdyaslrsivassgtlefitegftw
agvtqnggsgackrgpansffsrlnwltksgntypvlnvtmpnnnnfdklyiwgvhhpst
nqeqtslyiqasgrvtvstrrsqqtiipnigsrplvrgqsgrisvywtivkpgdilvins
ngnliaprgyfkmhigkssimrsdapidtcisecitpngsipnekpfqnvnkitygacpk
yvkqntlklatgmrnvp

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6n4fB (B:)
glfgaiagfiengwegmvdgwygfrhqnsegtgqaadlkstqaaidqingklnrviektn
ekfhqiekefsevegriqdleryvedtkvdlwsynaellvalenqntidltdsemnklfe
ktrrqlrenaedmgngcfkiyhkcdnaciesirngtydhniyrdeavnnrfqiksgrlvp
rg

    Sequence, based on observed residues (ATOM records): (download) 
    >6n4fB (B:)
glfgaiagfiengwegmvdgwygfrhqnsegtgqaadlkstqaaidqingklnrviektn
ekfhqiekefsevegriqdleryvedtkvdlwsynaellvalenqntidltdsemnklfe
ktrrqlrenaedmgngcfkiyhkcdnaciesirngtydhniyrdeavnnrfq

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6n4fC (C:)
adlgsqnllgnennaatlclghhavpngtmvktitddqievtnatelvqnsstgkicnnp
hkildgrdctlidallgdphcdvfqnetwdlfversnafsncypydvpdyaslrsivass
gtlefitegftwagvtqnggsgackrgpansffsrlnwltksgntypvlnvtmpnnnnfd
klyiwgvhhpstnqeqtslyiqasgrvtvstrrsqqtiipnigsrplvrgqsgrisvywt
ivkpgdilvinsngnliaprgyfkmhigkssimrsdapidtcisecitpngsipnekpfq
nvnkitygacpkyvkqntlklatgmrnvperqtr

    Sequence, based on observed residues (ATOM records): (download) 
    >6n4fC (C:)
nnaatlclghhavpngtmvktitddqievtnatelvqnsstgkicnnphkildgrdctli
dallgdphcdvfqnetwdlfversnafsncypydvpdyaslrsivassgtlefitegftw
agvtqnggsgackrgpansffsrlnwltksgntypvlnvtmpnnnnfdklyiwgvhhpst
nqeqtslyiqasgrvtvstrrsqqtiipnigsrplvrgqsgrisvywtivkpgdilvins
ngnliaprgyfkmhigkssimrsdapidtcisecitpngsipnekpfqnvnkitygacpk
yvkqntlklatgmrnvp

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6n4fD (D:)
glfgaiagfiengwegmvdgwygfrhqnsegtgqaadlkstqaaidqingklnrviektn
ekfhqiekefsevegriqdleryvedtkvdlwsynaellvalenqntidltdsemnklfe
ktrrqlrenaedmgngcfkiyhkcdnaciesirngtydhniyrdeavnnrfqiksgrlvp
rg

    Sequence, based on observed residues (ATOM records): (download) 
    >6n4fD (D:)
glfgaiagfiengwegmvdgwygfrhqnsegtgqaadlkstqaaidqingklnrviektn
ekfhqiekefsevegriqdleryvedtkvdlwsynaellvalenqntidltdsemnklfe
ktrrqlrenaedmgngcfkiyhkcdnaciesirngtydhniyrdeavnnrfq

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >6n4fE (E:)
adlgsqnllgnennaatlclghhavpngtmvktitddqievtnatelvqnsstgkicnnp
hkildgrdctlidallgdphcdvfqnetwdlfversnafsncypydvpdyaslrsivass
gtlefitegftwagvtqnggsgackrgpansffsrlnwltksgntypvlnvtmpnnnnfd
klyiwgvhhpstnqeqtslyiqasgrvtvstrrsqqtiipnigsrplvrgqsgrisvywt
ivkpgdilvinsngnliaprgyfkmhigkssimrsdapidtcisecitpngsipnekpfq
nvnkitygacpkyvkqntlklatgmrnvperqtr

    Sequence, based on observed residues (ATOM records): (download) 
    >6n4fE (E:)
nnaatlclghhavpngtmvktitddqievtnatelvqnsstgkicnnphkildgrdctli
dallgdphcdvfqnetwdlfversnafsncypydvpdyaslrsivassgtlefitegftw
agvtqnggsgackrgpansffsrlnwltksgntypvlnvtmpnnnnfdklyiwgvhhpst
nqeqtslyiqasgrvtvstrrsqqtiipnigsrplvrgqsgrisvywtivkpgdilvins
ngnliaprgyfkmhigkssimrsdapidtcisecitpngsipnekpfqnvnkitygacpk
yvkqntlklatgmrnvp

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >6n4fF (F:)
glfgaiagfiengwegmvdgwygfrhqnsegtgqaadlkstqaaidqingklnrviektn
ekfhqiekefsevegriqdleryvedtkvdlwsynaellvalenqntidltdsemnklfe
ktrrqlrenaedmgngcfkiyhkcdnaciesirngtydhniyrdeavnnrfqiksgrlvp
rg

    Sequence, based on observed residues (ATOM records): (download) 
    >6n4fF (F:)
glfgaiagfiengwegmvdgwygfrhqnsegtgqaadlkstqaaidqingklnrviektn
ekfhqiekefsevegriqdleryvedtkvdlwsynaellvalenqntidltdsemnklfe
ktrrqlrenaedmgngcfkiyhkcdnaciesirngtydhniyrdeavnnrfq

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >6n4fG (G:)
adlgsqnllgnennaatlclghhavpngtmvktitddqievtnatelvqnsstgkicnnp
hkildgrdctlidallgdphcdvfqnetwdlfversnafsncypydvpdyaslrsivass
gtlefitegftwagvtqnggsgackrgpansffsrlnwltksgntypvlnvtmpnnnnfd
klyiwgvhhpstnqeqtslyiqasgrvtvstrrsqqtiipnigsrplvrgqsgrisvywt
ivkpgdilvinsngnliaprgyfkmhigkssimrsdapidtcisecitpngsipnekpfq
nvnkitygacpkyvkqntlklatgmrnvperqtr

    Sequence, based on observed residues (ATOM records): (download) 
    >6n4fG (G:)
nnaatlclghhavpngtmvktitddqievtnatelvqnsstgkicnnphkildgrdctli
dallgdphcdvfqnetwdlfversnafsncypydvpdyaslrsivassgtlefitegftw
agvtqnggsgackrgpansffsrlnwltksgntypvlnvtmpnnnnfdklyiwgvhhpst
nqeqtslyiqasgrvtvstrrsqqtiipnigsrplvrgqsgrisvywtivkpgdilvins
ngnliaprgyfkmhigkssimrsdapidtcisecitpngsipnekpfqnvnkitygacpk
yvkqntlklatgmrnvp

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >6n4fH (H:)
glfgaiagfiengwegmvdgwygfrhqnsegtgqaadlkstqaaidqingklnrviektn
ekfhqiekefsevegriqdleryvedtkvdlwsynaellvalenqntidltdsemnklfe
ktrrqlrenaedmgngcfkiyhkcdnaciesirngtydhniyrdeavnnrfqiksgrlvp
rg

    Sequence, based on observed residues (ATOM records): (download) 
    >6n4fH (H:)
glfgaiagfiengwegmvdgwygfrhqnsegtgqaadlkstqaaidqingklnrviektn
ekfhqiekefsevegriqdleryvedtkvdlwsynaellvalenqntidltdsemnklfe
ktrrqlrenaedmgngcfkiyhkcdnaciesirngtydhniyrdeavnnrfq