PDB entry 6kmb

View 6kmb on RCSB PDB site
Description: Crystal structure of Sth1 bromodomain
Class: gene regulation
Keywords: Chromatin remodeling, histone acetylation, RSC complex, Sth1, bromodomain, GENE REGULATION
Deposited on 2019-07-31, released 2019-10-30
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-01-22, with a file datestamp of 2020-01-17.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: N/A
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Nuclear protein STH1/NPS1
    Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
    Gene: STH1, NPS1, YIL126W
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6kmba_
  • Chain 'B':
    Compound: Nuclear protein STH1/NPS1
    Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
    Gene: STH1, NPS1, YIL126W
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6kmbb_
  • Chain 'C':
    Compound: Nuclear protein STH1/NPS1
    Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
    Gene: STH1, NPS1, YIL126W
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6kmbc_
  • Chain 'D':
    Compound: Nuclear protein STH1/NPS1
    Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
    Gene: STH1, NPS1, YIL126W
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6kmbd_
  • Heterogens: GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6kmbA (A:)
slgifptveklveemreqldevdshprtsifeklpskrdypdyfkviekpmaidiilknc
kngtyktleevrqalqtmfenarfyneegswvyvdadklneftdewfkehss

    Sequence, based on observed residues (ATOM records): (download) 
    >6kmbA (A:)
lgifptveklveemreqldevdshprtsifeklpskrdypdyfkviekpmaidiilknck
ngtyktleevrqalqtmfenarfyneegswvyvdadklneftdewfkehs

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6kmbB (B:)
slgifptveklveemreqldevdshprtsifeklpskrdypdyfkviekpmaidiilknc
kngtyktleevrqalqtmfenarfyneegswvyvdadklneftdewfkehss

    Sequence, based on observed residues (ATOM records): (download) 
    >6kmbB (B:)
lgifptveklveemreqldevdshprtsifeklpskrdypdyfkviekpmaidiilknck
ngtyktleevrqalqtmfenarfyneegswvyvdadklneftdewfkeh

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6kmbC (C:)
slgifptveklveemreqldevdshprtsifeklpskrdypdyfkviekpmaidiilknc
kngtyktleevrqalqtmfenarfyneegswvyvdadklneftdewfkehss

    Sequence, based on observed residues (ATOM records): (download) 
    >6kmbC (C:)
gifptveklveemreqldevdshprtsifeklpskrdypdyfkviekpmaidiilknckn
gtyktleevrqalqtmfenarfyneegswvyvdadklneftdewfkeh

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6kmbD (D:)
slgifptveklveemreqldevdshprtsifeklpskrdypdyfkviekpmaidiilknc
kngtyktleevrqalqtmfenarfyneegswvyvdadklneftdewfkehss

    Sequence, based on observed residues (ATOM records): (download) 
    >6kmbD (D:)
ifptveklveemreqldevdshprtsifeklpskrdypdyfkviekpmaidiilknckng
tyktleevrqalqtmfenarfyneegswvyvdadklneftdewfkehs