PDB entry 5yhq

View 5yhq on RCSB PDB site
Description: Cryo-EM Structure of CVA6 VLP
Class: virus like particle
Keywords: Coxsackievirus A6, virus-like particle, cryo-EM, near-atomic resolution structure, epitope, VIRUS LIKE PARTICLE
Deposited on 2017-09-29, released 2017-10-25
The last revision prior to the SCOPe 2.06 freeze date was dated 2017-10-25, with a file datestamp of 2017-10-20.
Experiment type: EM
Resolution: 3 Å
R-factor: N/A
AEROSPACI score: 0.15 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Capsid protein VP1
    Species: Coxsackievirus A6 [TaxId:86107]
    Gene: VP1
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: capsid protein VP0
    Species: Coxsackievirus A6 [TaxId:86107]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: capsid protein vp3
    Species: Coxsackievirus A6 [TaxId:86107]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5yhqc_

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5yhqC (C:)
glptelkpgtnqflttddgtsppilpgfeptplihipgeftslldlcrietilevnnttg
ttgvnrllipvraqnnvdqlcasfqvdpgrngpwqstmvgqicryytqwsgslkvtfmft
gsfmatgkmliaytppgsaqpttreaamlgthivwdfglqssvtlvipwisnthfravkt
ggvydyyatgivtiwyqtnfvvppdtpseaniialgaaqenftlklckdtdeirqtaeyq

    Sequence, based on observed residues (ATOM records): (download) 
    >5yhqC (C:)
glptelkpgtnqflttddgtsppilpgfeptplihipgeftslldlcrietilevnnttg
ttgvnrllipvraqnnvdqlcasfqvdpgrngpwqstmvgqicryytqwsgslkvtfmft
gsfmatgkmliaytppgsaqpttreaamlgthivwdfglqssvtlvipwisnthfatgiv
tiwyqtnfvvppdtpseaniialgaaqenftlklckdtdeirqtaeyq