PDB entry 5y5q
View 5y5q on RCSB PDB site
Description: Crystal structure of the WSSV dUTPase D88N/R158E mutant in complex with dUTP
Class: viral protein
Keywords: dUTPase, WSSV, pyrophosphatase, dUTP, VIRAL PROTEIN
Deposited on
2017-08-09, released
2017-12-06
The last revision prior to the SCOPe 2.06 freeze date was dated
2017-12-06, with a file datestamp of
2017-12-01.
Experiment type: XRAY
Resolution: 1.56 Å
R-factor: N/A
AEROSPACI score: 0.46
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Wsv112
Species: White spot syndrome virus (isolate Shrimp/China/Tongan/1996) [TaxId:654913]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5y5qa_ - Chain 'B':
Compound: Wsv112
Species: White spot syndrome virus (isolate Shrimp/China/Tongan/1996) [TaxId:654913]
Database cross-references and differences (RAF-indexed):
- Uniprot Q77J78
- engineered mutation (90)
- engineered mutation (160)
- Chain 'C':
Compound: Wsv112
Species: White spot syndrome virus (isolate Shrimp/China/Tongan/1996) [TaxId:654913]
Database cross-references and differences (RAF-indexed):
- Heterogens: DUT, MG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5y5qA (A:)
snamdssasvvfmrfappgeetalpprratpgsvaydlfpseemdiepmglakistgygi
dkfpdgcygqivsrsgmtwknntsvptgtinvdyrgelkvilrnhsaeksvpirkgtsia
qliflrycdveeeqivyinettgertiidssskkdnknqaesvrgtggfgstdn
Sequence, based on observed residues (ATOM records): (download)
>5y5qA (A:)
ssasvvfmrfappgeetalpprratpgsvaydlfpseemdiepmglakistgygidkfpd
gcygqivsrsgmtwknntsvptgtinvdyrgelkvilrnhsaeksvpirkgtsiaqlifl
rycdveeeqivyinettgertiidsssk
- Chain 'B':
No sequence available.
- Chain 'C':
No sequence available.