PDB entry 5wpw

View 5wpw on RCSB PDB site
Description: Crystal structure of coconut allergen cocosin
Class: allergen
Keywords: 11S globulin, seed storage protein, allergen
Deposited on 2016-11-21, released 2017-10-25
The last revision prior to the SCOPe 2.06 freeze date was dated 2017-10-25, with a file datestamp of 2017-10-20.
Experiment type: XRAY
Resolution: 1.85 Å
R-factor: N/A
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 11S globulin isoform 1
    Species: Cocos nucifera [TaxId:13894]
    Gene: COS-1
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A0R7UCU5 (0-End)
      • engineered mutation (355)
      • engineered mutation (373)
    Domains in SCOPe 2.06: d5wpwa1, d5wpwa2
  • Chain 'B':
    Compound: 11S globulin isoform 1
    Species: Cocos nucifera [TaxId:13894]
    Gene: COS-1
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A0R7UCU5
      • engineered mutation (355)
      • engineered mutation (373)
    Domains in SCOPe 2.06: d5wpwb1, d5wpwb2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5wpwA (A:)
necrierlnaleptrtvrseagvtdyfdedneqfrcagvstirrvieprglllpsmsnap
rlvyivqgrgivglvmpgcpetfqsfqrsereegerhrwsrdehqkvyqfqegdvlavpn
gfaywcynngenpvvaitvldtsndanqldrshrqfllagrqeqgrqrygregsikenil
rgfstellaaafgvnmelarklqcrddtrgeivraenglqvlrpsgmeeeereegrsing
feetycsmkikqnigdprradvfnprggrittlnseklpilrfiqmsaervvlyrnamvs
phwninahsimyctggrgrvevaddrgetvfdgelrqgqllivpqnfamleragsegfql
vsiktsdramvstivgktsalrgmpvevlmnsyrlsrdearrvkltrgdevaiftprres
raea

    Sequence, based on observed residues (ATOM records): (download) 
    >5wpwA (A:)
necrierlnaleptrtvrseagvtdyfdedneqfrcagvstirrvieprglllpsmsnap
rlvyivqgrgivglvmpgcpetfqsfqrdehqkvyqfqegdvlavpngfaywcynngenp
vvaitvldtsndanqldrshrqfllagrqeqsikenilrgfstellaaafgvnmelarkl
qcrddtrgeivraenglqvlrpgfeetycsmkikqnigdprradvfnprggrittlnsek
lpilrfiqmsaervvlyrnamvsphwninahsimyctggrgrvevaddrgetvfdgelrq
gqllivpqnfamleragsegfqlvsiktsdramvstivgktsalrgmpvevlmnsyrlsr
dearrvkltrgdevaiftp

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5wpwB (B:)
necrierlnaleptrtvrseagvtdyfdedneqfrcagvstirrvieprglllpsmsnap
rlvyivqgrgivglvmpgcpetfqsfqrsereegerhrwsrdehqkvyqfqegdvlavpn
gfaywcynngenpvvaitvldtsndanqldrshrqfllagrqeqgrqrygregsikenil
rgfstellaaafgvnmelarklqcrddtrgeivraenglqvlrpsgmeeeereegrsing
feetycsmkikqnigdprradvfnprggrittlnseklpilrfiqmsaervvlyrnamvs
phwninahsimyctggrgrvevaddrgetvfdgelrqgqllivpqnfamleragsegfql
vsiktsdramvstivgktsalrgmpvevlmnsyrlsrdearrvkltrgdevaiftprres
raea

    Sequence, based on observed residues (ATOM records): (download) 
    >5wpwB (B:)
ecrierlnaleptrtvrseagvtdyfdedneqfrcagvstirrvieprglllpsmsnapr
lvyivqgrgivglvmpgcpetfqsfrdehqkvyqfqegdvlavpngfaywcynngenpvv
aitvldtsndanqldrshrqfllagrqeqikenilrgfstellaaafgvnmelarklqcr
ddtrgeivraenglqvlrpsgfeetycsmkikqnigdprradvfnprggrittlnseklp
ilrfiqmsaervvlyrnamvsphwninahsimyctggrgrvevaddrgetvfdgelrqgq
llivpqnfamleragsegfqlvsiktsdramvstivgktsalrgmpvevlmnsyrlsrde
arrvkltrgdevaiftp