PDB entry 5wk3

View 5wk3 on RCSB PDB site
Description: crystal structure of the complex between ccl17 and m116 fab
Class: immune system
Keywords: immune system
Deposited on 2017-07-24, released 2017-12-20
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-12-20, with a file datestamp of 2017-12-15.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: N/A
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: C-C motif chemokine 17
    Species: Homo sapiens [TaxId:9606]
    Gene: CCL17, SCYA17, TARC
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5wk3a_
  • Chain 'B':
    Compound: C-C motif chemokine 17
    Species: Homo sapiens [TaxId:9606]
    Gene: CCL17, SCYA17, TARC
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5wk3b_
  • Chain 'C':
    Compound: C-C motif chemokine 17
    Species: Homo sapiens [TaxId:9606]
    Gene: CCL17, SCYA17, TARC
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5wk3c_
  • Chain 'D':
    Compound: C-C motif chemokine 17
    Species: Homo sapiens [TaxId:9606]
    Gene: CCL17, SCYA17, TARC
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5wk3d_
  • Chain 'P':
    Compound: m116 light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 5WK3 (0-End)
    Domains in SCOPe 2.07: d5wk3p1, d5wk3p2
  • Chain 'Q':
    Compound: m116 heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 5WK3 (0-End)
  • Chain 'R':
    Compound: m116 light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 5WK3 (0-End)
    Domains in SCOPe 2.07: d5wk3r1, d5wk3r2
  • Chain 'S':
    Compound: m116 heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 5WK3 (0-End)
  • Chain 'T':
    Compound: m116 light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 5WK3 (0-End)
    Domains in SCOPe 2.07: d5wk3t1, d5wk3t2
  • Chain 'U':
    Compound: m116 heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 5WK3 (0-End)
  • Chain 'V':
    Compound: m116 light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 5WK3
    Domains in SCOPe 2.07: d5wk3v1, d5wk3v2
  • Chain 'W':
    Compound: m116 heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 5WK3 (0-End)
  • Heterogens: GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >5wk3A (A:)
    argtnvtreccleyfkgaiplrklktwyqtsedcsrdaivfvtvqgraicsdpnnkrvkn
    avkylqslers
    

    Sequence, based on observed residues (ATOM records): (download)
    >5wk3A (A:)
    eccleyfkgaiplrklktwyqtsedcsrdaivfvtvqgraicsdpnnkrvknavkylqsl
    er
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >5wk3B (B:)
    argtnvtreccleyfkgaiplrklktwyqtsedcsrdaivfvtvqgraicsdpnnkrvkn
    avkylqslers
    

    Sequence, based on observed residues (ATOM records): (download)
    >5wk3B (B:)
    eccleyfkgaiplrklktwyqtsedcsrdaivfvtvqgraicsdpnnkrvknavkylqsl
    ers
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >5wk3C (C:)
    argtnvtreccleyfkgaiplrklktwyqtsedcsrdaivfvtvqgraicsdpnnkrvkn
    avkylqslers
    

    Sequence, based on observed residues (ATOM records): (download)
    >5wk3C (C:)
    treccleyfkgaiplrklktwyqtsedcsrdaivfvtvqgraicsdpnnkrvknavkylq
    sler
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >5wk3D (D:)
    argtnvtreccleyfkgaiplrklktwyqtsedcsrdaivfvtvqgraicsdpnnkrvkn
    avkylqslers
    

    Sequence, based on observed residues (ATOM records): (download)
    >5wk3D (D:)
    ccleyfkgaiplrklktwyqtsedcsrdaivfvtvqgraicsdpnnkrvknavkylqsle
    r
    

  • Chain 'P':
    Sequence, based on SEQRES records: (download)
    >5wk3P (P:)
    divmtqspdslavslgeratinckssqsvllspwnsnqlawyqqkpgqppklliygastr
    esgvpdrfsgsgsgtdftltisslqaedvavyycqqyylipstfgqgtkveikrtvaaps
    vfifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstys
    lsstltlskadyekhkvyacevthqglsspvtksfnrgec
    

    Sequence, based on observed residues (ATOM records): (download)
    >5wk3P (P:)
    divmtqspdslavslgeratinckssqsvllspwnsnqlawyqqkpgqppklliygastr
    esgvpdrfsgsgsgtdftltisslqaedvavyycqqyylipstfgqgtkveikrtvaaps
    vfifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstys
    lsstltlskadyekhkvyacevthqglsspvtksfnr
    

  • Chain 'Q':
    No sequence available.

  • Chain 'R':
    Sequence, based on SEQRES records: (download)
    >5wk3R (R:)
    divmtqspdslavslgeratinckssqsvllspwnsnqlawyqqkpgqppklliygastr
    esgvpdrfsgsgsgtdftltisslqaedvavyycqqyylipstfgqgtkveikrtvaaps
    vfifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstys
    lsstltlskadyekhkvyacevthqglsspvtksfnrgec
    

    Sequence, based on observed residues (ATOM records): (download)
    >5wk3R (R:)
    divmtqspdslavslgeratinckssqsvllspwnsnqlawyqqkpgqppklliygastr
    esgvpdrfsgsgsgtdftltisslqaedvavyycqqyylipstfgqgtkveikrtvaaps
    vfifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstys
    lsstltlskadyekhkvyacevthqglsspvtksfnr
    

  • Chain 'S':
    No sequence available.

  • Chain 'T':
    Sequence, based on SEQRES records: (download)
    >5wk3T (T:)
    divmtqspdslavslgeratinckssqsvllspwnsnqlawyqqkpgqppklliygastr
    esgvpdrfsgsgsgtdftltisslqaedvavyycqqyylipstfgqgtkveikrtvaaps
    vfifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstys
    lsstltlskadyekhkvyacevthqglsspvtksfnrgec
    

    Sequence, based on observed residues (ATOM records): (download)
    >5wk3T (T:)
    divmtqspdslavslgeratinckssqsvllspwnsnqlawyqqkpgqppklliygastr
    esgvpdrfsgsgsgtdftltisslqaedvavyycqqyylipstfgqgtkveikrtvaaps
    vfifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstys
    lsstltlskadyekhkvyacevthqglsspvtksfnrg
    

  • Chain 'U':
    No sequence available.

  • Chain 'V':
    Sequence, based on SEQRES records: (download)
    >5wk3V (V:)
    divmtqspdslavslgeratinckssqsvllspwnsnqlawyqqkpgqppklliygastr
    esgvpdrfsgsgsgtdftltisslqaedvavyycqqyylipstfgqgtkveikrtvaaps
    vfifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstys
    lsstltlskadyekhkvyacevthqglsspvtksfnrgec
    

    Sequence, based on observed residues (ATOM records): (download)
    >5wk3V (V:)
    ivmtqspdslavslgeratinckssqsvllspwnsnqlawyqqkpgqppklliygastre
    sgvpdrfsgsgsgtdftltisslqaedvavyycqqyylipstfgqgtkveikrtvaapsv
    fifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstysl
    sstltlskadyekhkvyacevthqglsspvtksfnr
    

  • Chain 'W':
    No sequence available.