PDB entry 5wip

View 5wip on RCSB PDB site
Description: TraE protein in complex with 2-(2-furyl)isonicotinic acid
Class: protein transport
Keywords: Type IV Secretion System, Fragment-Based Drug Design, Complex, Inhibitor, Antimicrobial Resistance, Bacterial secretion, VirB, PROTEIN TRANSPORT
Deposited on 2017-07-19, released 2017-11-15
The last revision prior to the SCOPe 2.06 freeze date was dated 2017-11-15, with a file datestamp of 2017-11-10.
Experiment type: XRAY
Resolution: 2.62 Å
R-factor: N/A
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Conjugal transfer protein
    Species: Escherichia coli [TaxId:562]
    Gene: traE, B634_00049, BE957_00530, ECONIH1_27615, pec386IL_00125, pEcNDM0_00049, pHKU1_33, pKC394-028, pKC396-021, pMUR050_041, pN3_023
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5wipa_
  • Chain 'B':
    Compound: Conjugal transfer protein
    Species: Escherichia coli [TaxId:562]
    Gene: traE, B634_00049, BE957_00530, ECONIH1_27615, pec386IL_00125, pEcNDM0_00049, pHKU1_33, pKC394-028, pKC396-021, pMUR050_041, pN3_023
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5wipb_
  • Chain 'C':
    Compound: Conjugal transfer protein
    Species: Escherichia coli [TaxId:562]
    Gene: traE, B634_00049, BE957_00530, ECONIH1_27615, pec386IL_00125, pEcNDM0_00049, pHKU1_33, pKC394-028, pKC396-021, pMUR050_041, pN3_023
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5wipc_
  • Chain 'D':
    Compound: Conjugal transfer protein
    Species: Escherichia coli [TaxId:562]
    Gene: traE, B634_00049, BE957_00530, ECONIH1_27615, pec386IL_00125, pEcNDM0_00049, pHKU1_33, pKC394-028, pKC396-021, pMUR050_041, pN3_023
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5wipd_
  • Heterogens: XXO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5wipA (A:)
ahlltlneathevqqvkltrdqtsygdeidkfwltqyvihresydfysvqvdytavglms
tpnvaesyqskfkgrngldkvlgdsettrvkinsvildkphgvatirfttvrrvrsnpvd
dqpqrwiaimgyeykslamnaeqryvnplgfrvtsyrvnpevn

    Sequence, based on observed residues (ATOM records): (download) 
    >5wipA (A:)
trdqtsygdeidkfwltqyvihresydfysvqvdytavglmstpnvaesyqskfkgrngl
dkvlgdsettrvkinsvildkphgvatirfttvrrvrsnpvddqpqrwiaimgyeyksla
mnaeqryvnplgfrvtsyrvnpe

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5wipB (B:)
ahlltlneathevqqvkltrdqtsygdeidkfwltqyvihresydfysvqvdytavglms
tpnvaesyqskfkgrngldkvlgdsettrvkinsvildkphgvatirfttvrrvrsnpvd
dqpqrwiaimgyeykslamnaeqryvnplgfrvtsyrvnpevn

    Sequence, based on observed residues (ATOM records): (download) 
    >5wipB (B:)
trdqtsygdeidkfwltqyvihresydfysvqvdytavglmstpnvaesyqskfkgrngl
dkvlgdsettrvkinsvildkphgvatirfttvrrvrsnpvddqpqrwiaimgyeyksla
mnaeqryvnplgfrvtsyrvnpe

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5wipC (C:)
ahlltlneathevqqvkltrdqtsygdeidkfwltqyvihresydfysvqvdytavglms
tpnvaesyqskfkgrngldkvlgdsettrvkinsvildkphgvatirfttvrrvrsnpvd
dqpqrwiaimgyeykslamnaeqryvnplgfrvtsyrvnpevn

    Sequence, based on observed residues (ATOM records): (download) 
    >5wipC (C:)
tsygdeidkfwltqyvihresydfysvqvdytavglmstpnvaesyqskfkgrngldkvl
gdsettrvkinsvildkphgvatirfttvrrvrsnpvddqpqrwiaimgyeykmnaeqry
vnplgfrvtsyrvnpe

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5wipD (D:)
ahlltlneathevqqvkltrdqtsygdeidkfwltqyvihresydfysvqvdytavglms
tpnvaesyqskfkgrngldkvlgdsettrvkinsvildkphgvatirfttvrrvrsnpvd
dqpqrwiaimgyeykslamnaeqryvnplgfrvtsyrvnpevn

    Sequence, based on observed residues (ATOM records): (download) 
    >5wipD (D:)
tsygdeidkfwltqyvihresydfysvqvdytavglmstpnvaesyqskfkgrngldkvl
gdsettrvkinsvildkphgvatirfttvrrvrsnpvddqpqrwiaimgyeyknaeqryv
nplgfrvtsyrvnpe