PDB entry 5o02

View 5o02 on RCSB PDB site
Description: GII.17 Kawasaki323 protruding domain in complex with Nanobody Nano-4
Class: viral protein
Keywords: Norovirus, Protruding domain, capsid, VHH, Nanobody, Viral protein
Deposited on 2017-05-16, released 2017-10-04
The last revision prior to the SCOPe 2.06 freeze date was dated 2017-10-04, with a file datestamp of 2017-09-29.
Experiment type: XRAY
Resolution: 1.72 Å
R-factor: N/A
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: capsid protein
    Species: Norovirus 13-BH-1/2013/GII.17 [TaxId:1508693]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Nanobody (VHH) Nano-4
    Species: VICUGNA PACOS [TaxId:30538]
    Database cross-references and differences (RAF-indexed):
    • PDB 5O02 (0-123)
    Domains in SCOPe 2.06: d5o02c_
  • Heterogens: EDO, IMD, HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >5o02C (C:)
qvqlqesggglvqpggslrlfcaasgftfssyamrwyrqapgkerelvaaitsaggsthy
adsvkerftisrdnakntmylqmnslkpedtavyycnarrdygdswftagggywgqgtqv
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