PDB entry 5n5d

View 5n5d on RCSB PDB site
Description: Crystal Structure of the O-Methyltransferase TomG from Streptomyces achromogenes involved in Tomaymycin synthesis in complex with SAM
Class: transferase
Keywords: o-Methyltransferase, tomaymycin, Rossmann-like fold, S-adenosyl methionine, TRANSFERASE
Deposited on 2017-02-13, released 2017-09-20
The last revision prior to the SCOPe 2.06 freeze date was dated 2017-09-20, with a file datestamp of 2017-09-15.
Experiment type: XRAY
Resolution: 1.55 Å
R-factor: N/A
AEROSPACI score: 0.46 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Methyltransferase
    Species: Streptomyces regensis [TaxId:68263]
    Gene: ACZ91_32315
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A0J8AIC3 (4-225)
      • expression tag (2-3)
      • conflict (14)
    Domains in SCOPe 2.06: d5n5da1, d5n5da2
  • Chain 'B':
    Compound: Methyltransferase
    Species: Streptomyces regensis [TaxId:68263]
    Gene: ACZ91_32315
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A0J8AIC3 (4-225)
      • expression tag (3)
      • conflict (14)
    Domains in SCOPe 2.06: d5n5db1, d5n5db2
  • Heterogens: BU3, GOL, SAM, SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5n5dA (A:)
gphmmeqerwnsvdvyfssllvkedealskaaqahrefdlpdlavsapqgkllhllarlr
qarrileigtfggyssiwlaralppdgrlvtiewersfaesaasrlaeagvahlveqhvg
raldilptldrpgtapfdmvfvdankpdipeyftwalklsrpgavvvvdnvvlggavtdp
dhpdagvqgvrrfhemlagrsdvtatsiqtvgtkgydgftlalvtg

    Sequence, based on observed residues (ATOM records): (download) 
    >5n5dA (A:)
hmmeqerwnsvdvyfssllvkedealskaaqahrefdlpdlavsapqgkllhllarlrqa
rrileigtfggyssiwlaralppdgrlvtiewersfaesaasrlaeagvahlveqhvgra
ldilptldrpgtapfdmvfvdankpdipeyftwalklsrpgavvvvdnvvlggavtdpdh
pdagvqgvrrfhemlagrsdvtatsiqtvgtkgydgftlalvtg

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5n5dB (B:)
gphmmeqerwnsvdvyfssllvkedealskaaqahrefdlpdlavsapqgkllhllarlr
qarrileigtfggyssiwlaralppdgrlvtiewersfaesaasrlaeagvahlveqhvg
raldilptldrpgtapfdmvfvdankpdipeyftwalklsrpgavvvvdnvvlggavtdp
dhpdagvqgvrrfhemlagrsdvtatsiqtvgtkgydgftlalvtg

    Sequence, based on observed residues (ATOM records): (download) 
    >5n5dB (B:)
mmeqerwnsvdvyfssllvkedealskaaqahrefdlpdlavsapqgkllhllarlrqar
rileigtfggyssiwlaralppdgrlvtiewersfaesaasrlaeagvahlveqhvgral
dilptldrpgtapfdmvfvdankpdipeyftwalklsrpgavvvvdnvvlggavtdpdhp
dagvqgvrrfhemlagrsdvtatsiqtvgtkgydgftlalvtg