PDB entry 5ll1

View 5ll1 on RCSB PDB site
Description: Crystal structure of urate oxidase from zebrafish
Class: oxidoreductase
Keywords: uric acid, urate, purine metabolism, uricolytic activities, oxidoreductase
Deposited on 2016-07-26, released 2017-01-25
The last revision prior to the SCOPe 2.06 freeze date was dated 2017-01-25, with a file datestamp of 2017-01-20.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: N/A
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Uricase
    Species: Danio rerio [TaxId:7955]
    Gene: uox
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5ll1a1, d5ll1a2
  • Chain 'B':
    Compound: Uricase
    Species: Danio rerio [TaxId:7955]
    Gene: uox
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5ll1b1, d5ll1b2
  • Chain 'C':
    Compound: Uricase
    Species: Danio rerio [TaxId:7955]
    Gene: uox
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5ll1c1, d5ll1c2
  • Chain 'D':
    Compound: Uricase
    Species: Danio rerio [TaxId:7955]
    Gene: uox
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5ll1d1, d5ll1d2
  • Chain 'E':
    Compound: Uricase
    Species: Danio rerio [TaxId:7955]
    Gene: uox
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5ll1e1, d5ll1e2
  • Chain 'F':
    Compound: Uricase
    Species: Danio rerio [TaxId:7955]
    Gene: uox
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5ll1f1, d5ll1f2
  • Chain 'G':
    Compound: Uricase
    Species: Danio rerio [TaxId:7955]
    Gene: uox
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5ll1g1, d5ll1g2
  • Chain 'H':
    Compound: Uricase
    Species: Danio rerio [TaxId:7955]
    Gene: uox
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5ll1h1, d5ll1h2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5ll1A (A:)
mattsnqnvefvrtgygknmvkvlhirregnhhhiielianvqltlktrkdyltgdnsdi
iptdtvkntvhalaklkgiksiesfaldicehfltafnhvtrvkvnidevpwkrlekngv
ehnhafihcpealrfceaeqylsktpvvhsglkdmkvlkttqtgfegflrdrfttltdak
drffctsvyarwryntinvafdaawkavkdtviqkfagpydrgeyspsvqktlydtqllv
ldripeveeieiimpnqhyfvidmtkiglsnkdevylpldnpsgnitgtvcrkprarm

    Sequence, based on observed residues (ATOM records): (download) 
    >5ll1A (A:)
nvefvrtgygknmvkvlhirregnhhhiielianvqltlktrkdyltgdnsdiiptdtvk
ntvhalaklkgiksiesfaldicehfltafnhvtrvkvnidevpwkrlekngvehnhafi
hcpealrfceaeqylsktpvvhsglkdmkvlkttqtgfegflrdrfttltdakdrffcts
vyarwryntinvafdaawkavkdtviqkfagpydrgeyspsvqktlydtqllvldripev
eeieiimpnqhyfvidmtkiglsnkdevylpldnpsgnitgtvcrkp

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5ll1B (B:)
mattsnqnvefvrtgygknmvkvlhirregnhhhiielianvqltlktrkdyltgdnsdi
iptdtvkntvhalaklkgiksiesfaldicehfltafnhvtrvkvnidevpwkrlekngv
ehnhafihcpealrfceaeqylsktpvvhsglkdmkvlkttqtgfegflrdrfttltdak
drffctsvyarwryntinvafdaawkavkdtviqkfagpydrgeyspsvqktlydtqllv
ldripeveeieiimpnqhyfvidmtkiglsnkdevylpldnpsgnitgtvcrkprarm

    Sequence, based on observed residues (ATOM records): (download) 
    >5ll1B (B:)
nvefvrtgygknmvkvlhirregnhhhiielianvqltlktrkdyltgdnsdiiptdtvk
ntvhalaklkgiksiesfaldicehfltafnhvtrvkvnidevpwkrlekngvehnhafi
hcpealrfceaeqylsktpvvhsglkdmkvlkttqtgfegflrdrfttltdakdrffcts
vyarwryntinvafdaawkavkdtviqkfagpydrgeyspsvqktlydtqllvldripev
eeieiimpnqhyfvidmtkiglsnkdevylpldnpsgnitgtvcrkp

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5ll1C (C:)
mattsnqnvefvrtgygknmvkvlhirregnhhhiielianvqltlktrkdyltgdnsdi
iptdtvkntvhalaklkgiksiesfaldicehfltafnhvtrvkvnidevpwkrlekngv
ehnhafihcpealrfceaeqylsktpvvhsglkdmkvlkttqtgfegflrdrfttltdak
drffctsvyarwryntinvafdaawkavkdtviqkfagpydrgeyspsvqktlydtqllv
ldripeveeieiimpnqhyfvidmtkiglsnkdevylpldnpsgnitgtvcrkprarm

    Sequence, based on observed residues (ATOM records): (download) 
    >5ll1C (C:)
nvefvrtgygknmvkvlhirregnhhhiielianvqltlktrkdyltgdnsdiiptdtvk
ntvhalaklkgiksiesfaldicehfltafnhvtrvkvnidevpwkrlekngvehnhafi
hcpealrfceaeqylsktpvvhsglkdmkvlkttqtgfegflrdrfttltdakdrffcts
vyarwryntinvafdaawkavkdtviqkfagpydrgeyspsvqktlydtqllvldripev
eeieiimpnqhyfvidmtkiglsnkdevylpldnpsgnitgtvcrkp

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5ll1D (D:)
mattsnqnvefvrtgygknmvkvlhirregnhhhiielianvqltlktrkdyltgdnsdi
iptdtvkntvhalaklkgiksiesfaldicehfltafnhvtrvkvnidevpwkrlekngv
ehnhafihcpealrfceaeqylsktpvvhsglkdmkvlkttqtgfegflrdrfttltdak
drffctsvyarwryntinvafdaawkavkdtviqkfagpydrgeyspsvqktlydtqllv
ldripeveeieiimpnqhyfvidmtkiglsnkdevylpldnpsgnitgtvcrkprarm

    Sequence, based on observed residues (ATOM records): (download) 
    >5ll1D (D:)
nvefvrtgygknmvkvlhirregnhhhiielianvqltlktrkdyltgdnsdiiptdtvk
ntvhalaklkgiksiesfaldicehfltafnhvtrvkvnidevpwkrlekngvehnhafi
hcpealrfceaeqylsktpvvhsglkdmkvlkttqtgfegflrdrfttltdakdrffcts
vyarwryntinvafdaawkavkdtviqkfagpydrgeyspsvqktlydtqllvldripev
eeieiimpnqhyfvidmtkiglsnkdevylpldnpsgnitgtvcrkp

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >5ll1E (E:)
mattsnqnvefvrtgygknmvkvlhirregnhhhiielianvqltlktrkdyltgdnsdi
iptdtvkntvhalaklkgiksiesfaldicehfltafnhvtrvkvnidevpwkrlekngv
ehnhafihcpealrfceaeqylsktpvvhsglkdmkvlkttqtgfegflrdrfttltdak
drffctsvyarwryntinvafdaawkavkdtviqkfagpydrgeyspsvqktlydtqllv
ldripeveeieiimpnqhyfvidmtkiglsnkdevylpldnpsgnitgtvcrkprarm

    Sequence, based on observed residues (ATOM records): (download) 
    >5ll1E (E:)
nvefvrtgygknmvkvlhirregnhhhiielianvqltlktrkdyltgdnsdiiptdtvk
ntvhalaklkgiksiesfaldicehfltafnhvtrvkvnidevpwkrlekngvehnhafi
hcpealrfceaeqylsktpvvhsglkdmkvlkttqtgfegflrdrfttltdakdrffcts
vyarwryntinvafdaawkavkdtviqkfagpydrgeyspsvqktlydtqllvldripev
eeieiimpnqhyfvidmtkiglsnkdevylpldnpsgnitgtvcrkp

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >5ll1F (F:)
mattsnqnvefvrtgygknmvkvlhirregnhhhiielianvqltlktrkdyltgdnsdi
iptdtvkntvhalaklkgiksiesfaldicehfltafnhvtrvkvnidevpwkrlekngv
ehnhafihcpealrfceaeqylsktpvvhsglkdmkvlkttqtgfegflrdrfttltdak
drffctsvyarwryntinvafdaawkavkdtviqkfagpydrgeyspsvqktlydtqllv
ldripeveeieiimpnqhyfvidmtkiglsnkdevylpldnpsgnitgtvcrkprarm

    Sequence, based on observed residues (ATOM records): (download) 
    >5ll1F (F:)
nvefvrtgygknmvkvlhirregnhhhiielianvqltlktrkdyltgdnsdiiptdtvk
ntvhalaklkgiksiesfaldicehfltafnhvtrvkvnidevpwkrlekngvehnhafi
hcpealrfceaeqylsktpvvhsglkdmkvlkttqtgfegflrdrfttltdakdrffcts
vyarwryntinvafdaawkavkdtviqkfagpydrgeyspsvqktlydtqllvldripev
eeieiimpnqhyfvidmtkiglsnkdevylpldnpsgnitgtvcrkp

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >5ll1G (G:)
mattsnqnvefvrtgygknmvkvlhirregnhhhiielianvqltlktrkdyltgdnsdi
iptdtvkntvhalaklkgiksiesfaldicehfltafnhvtrvkvnidevpwkrlekngv
ehnhafihcpealrfceaeqylsktpvvhsglkdmkvlkttqtgfegflrdrfttltdak
drffctsvyarwryntinvafdaawkavkdtviqkfagpydrgeyspsvqktlydtqllv
ldripeveeieiimpnqhyfvidmtkiglsnkdevylpldnpsgnitgtvcrkprarm

    Sequence, based on observed residues (ATOM records): (download) 
    >5ll1G (G:)
nvefvrtgygknmvkvlhirregnhhhiielianvqltlktrkdyltgdnsdiiptdtvk
ntvhalaklkgiksiesfaldicehfltafnhvtrvkvnidevpwkrlekngvehnhafi
hcpealrfceaeqylsktpvvhsglkdmkvlkttqtgfegflrdrfttltdakdrffcts
vyarwryntinvafdaawkavkdtviqkfagpydrgeyspsvqktlydtqllvldripev
eeieiimpnqhyfvidmtkiglsnkdevylpldnpsgnitgtvcrkp

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >5ll1H (H:)
mattsnqnvefvrtgygknmvkvlhirregnhhhiielianvqltlktrkdyltgdnsdi
iptdtvkntvhalaklkgiksiesfaldicehfltafnhvtrvkvnidevpwkrlekngv
ehnhafihcpealrfceaeqylsktpvvhsglkdmkvlkttqtgfegflrdrfttltdak
drffctsvyarwryntinvafdaawkavkdtviqkfagpydrgeyspsvqktlydtqllv
ldripeveeieiimpnqhyfvidmtkiglsnkdevylpldnpsgnitgtvcrkprarm

    Sequence, based on observed residues (ATOM records): (download) 
    >5ll1H (H:)
nvefvrtgygknmvkvlhirregnhhhiielianvqltlktrkdyltgdnsdiiptdtvk
ntvhalaklkgiksiesfaldicehfltafnhvtrvkvnidevpwkrlekngvehnhafi
hcpealrfceaeqylsktpvvhsglkdmkvlkttqtgfegflrdrfttltdakdrffcts
vyarwryntinvafdaawkavkdtviqkfagpydrgeyspsvqktlydtqllvldripev
eeieiimpnqhyfvidmtkiglsnkdevylpldnpsgnitgtvcrkp