PDB entry 5lbs
View 5lbs on RCSB PDB site
Description: structural basis of Zika and Dengue virus potent antibody cross-neutralization
Class: immune system-viral protein
Keywords: immune system-viral protein complex, zika virus, broadly neutralizing antibody, immune system-viral protein
Deposited on
2016-06-17, released
2016-07-06
The last revision prior to the SCOPe 2.06 freeze date was dated
2016-07-06, with a file datestamp of
2016-07-01.
Experiment type: XRAY
Resolution: 2.41 Å
R-factor: N/A
AEROSPACI score: 0.22
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Envelope protein E
Species: Zika virus [TaxId:64320]
Database cross-references and differences (RAF-indexed):
- Chain 'B':
Compound: Envelope protein E
Species: Zika virus [TaxId:64320]
Database cross-references and differences (RAF-indexed):
- Chain 'H':
Compound: broadly neutralizing human antibody ede1 c8
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5lbsh_ - Chain 'I':
Compound: broadly neutralizing human antibody ede1 c8
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5lbsi_ - Chain 'L':
Compound: broadly neutralizing human antibody ede1 c8
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5lbsl_ - Chain 'M':
Compound: broadly neutralizing human antibody ede1 c8
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5lbsm_ - Heterogens: EDO, SO4, HOH
PDB Chain Sequences:
- Chain 'A':
No sequence available.
- Chain 'B':
No sequence available.
- Chain 'H':
Sequence, based on SEQRES records: (download)
>5lbsH (H:)
evqlvesggglvqpggslrlscsasgftfstysmhwvrqapgkgleyvsaitgegdsafy
adsvkgrftisrdnskntlyfemnslrpedtavyycvggysnfyyyytmdvwgqgttvtv
ssgtggsggggsggggsggga
Sequence, based on observed residues (ATOM records): (download)
>5lbsH (H:)
evqlvesggglvqpggslrlscsasgftfstysmhwvrqapgkgleyvsaitgegdsafy
adsvkgrftisrdnskntlyfemnslrpedtavyycvggysnfyyyytmdvwgqgttvtv
s
- Chain 'I':
Sequence, based on SEQRES records: (download)
>5lbsI (I:)
evqlvesggglvqpggslrlscsasgftfstysmhwvrqapgkgleyvsaitgegdsafy
adsvkgrftisrdnskntlyfemnslrpedtavyycvggysnfyyyytmdvwgqgttvtv
ssgtggsggggsggggsggga
Sequence, based on observed residues (ATOM records): (download)
>5lbsI (I:)
evqlvesggglvqpggslrlscsasgftfstysmhwvrqapgkgleyvsaitgegdsafy
adsvkgrftisrdnskntlyfemnslrpedtavyycvggysnfyyyytmdvwgqgttvtv
ss
- Chain 'L':
Sequence, based on SEQRES records: (download)
>5lbsL (L:)
seivltqspatlslspgeratlscrasqsistflawyqhkpgqaprlliydastratgvp
arfsgsrsgtdftltistlepedfavyycqqrynwppytfgqgtkveikaaaddddkagw
shpqfekgggsgggsgggswshpqfek
Sequence, based on observed residues (ATOM records): (download)
>5lbsL (L:)
eivltqspatlslspgeratlscrasqsistflawyqhkpgqaprlliydastratgvpa
rfsgsrsgtdftltistlepedfavyycqqrynwppytfgqgtkveikaaa
- Chain 'M':
Sequence, based on SEQRES records: (download)
>5lbsM (M:)
seivltqspatlslspgeratlscrasqsistflawyqhkpgqaprlliydastratgvp
arfsgsrsgtdftltistlepedfavyycqqrynwppytfgqgtkveikaaaddddkagw
shpqfekgggsgggsgggswshpqfek
Sequence, based on observed residues (ATOM records): (download)
>5lbsM (M:)
seivltqspatlslspgeratlscrasqsistflawyqhkpgqaprlliydastratgvp
arfsgsrsgtdftltistlepedfavyycqqrynwppytfgqgtkveikaaa