PDB entry 5kk0

View 5kk0 on RCSB PDB site
Description: Synechocystis ACO mutant - T136A
Class: oxidoreductase
Keywords: carotenoid cleavage dioxygenase, iron coordination, non-heme iron proteins, OXIDOREDUCTASE
Deposited on 2016-06-20, released 2016-07-13
The last revision prior to the SCOPe 2.08 freeze date was dated 2016-07-13, with a file datestamp of 2016-07-08.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: N/A
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Apocarotenoid-15,15'-oxygenase
    Species: Synechocystis sp. (strain PCC 6803 / Kazusa) [TaxId:1111708]
    Gene: sll1541
    Database cross-references and differences (RAF-indexed):
    • Uniprot P74334 (Start-489)
      • engineered mutation (135)
    Domains in SCOPe 2.08: d5kk0a_
  • Chain 'B':
    Compound: Apocarotenoid-15,15'-oxygenase
    Species: Synechocystis sp. (strain PCC 6803 / Kazusa) [TaxId:1111708]
    Gene: sll1541
    Database cross-references and differences (RAF-indexed):
    • Uniprot P74334 (Start-489)
      • engineered mutation (135)
    Domains in SCOPe 2.08: d5kk0b_
  • Chain 'C':
    Compound: Apocarotenoid-15,15'-oxygenase
    Species: Synechocystis sp. (strain PCC 6803 / Kazusa) [TaxId:1111708]
    Gene: sll1541
    Database cross-references and differences (RAF-indexed):
    • Uniprot P74334 (Start-489)
      • engineered mutation (135)
    Domains in SCOPe 2.08: d5kk0c_
  • Chain 'D':
    Compound: Apocarotenoid-15,15'-oxygenase
    Species: Synechocystis sp. (strain PCC 6803 / Kazusa) [TaxId:1111708]
    Gene: sll1541
    Database cross-references and differences (RAF-indexed):
    • Uniprot P74334 (Start-489)
      • engineered mutation (135)
    Domains in SCOPe 2.08: d5kk0d_
  • Heterogens: FE2, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5kk0A (A:)
mvtspptsspsqrsyspqdwlrgyqsqpqewdywvedvegsippdlqgtlyrngpgllei
gdrplkhpfdgdgmvtafkfpgdgrvhfqskfvrtqgyveeqkagkmiyrgvfgsqpagg
wlktifdlrlkniananitywgdrllalweggqphrlepsnlatiglddlggilaegqpl
sahpridpastfdggqpcyvtfsiksslsstltlleldpqgkllrqktetfpgfafihdf
aitphyaiflqnnvtlnglpylfglrgagecvqfhpdkpaqiilvprdggeikripvqag
fvfhhanafeengkiildsicynslpqvdtdgdfrstnfdnldpgqlwrftidpaaatve
kqlmvsrccefpvvhpqqvgrpyryvymgaahhstgnaplqailkvdlesgtetlrsfap
hgfagepifvprpggvaeddgwllcliykadlhrselvildaqditapaiatlklkhhip
yplhgswaqt

    Sequence, based on observed residues (ATOM records): (download) 
    >5kk0A (A:)
psqrsyspqdwlrgyqsqpqewdywvedvegsippdlqgtlyrngpglleigdrplkhpf
dgdgmvtafkfpgdgrvhfqskfvrtqgyveeqkagkmiyrgvfgsqpaggwlktifdlr
lkniananitywgdrllalweggqphrlepsnlatiglddlggilaegqplsahpridpa
stfdggqpcyvtfsiksslsstltlleldpqgkllrqktetfpgfafihdfaitphyaif
lqnnvtlnglpylfglrgagecvqfhpdkpaqiilvprdggeikripvqagfvfhhanaf
eengkiildsicynslpqvdtdgdfrstnfdnldpgqlwrftidpaaatvekqlmvsrcc
efpvvhpqqvgrpyryvymgaahhstgnaplqailkvdlesgtetlrsfaphgfagepif
vprpggvaeddgwllcliykadlhrselvildaqditapaiatlklkhhipyplhgswaq
t

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5kk0B (B:)
mvtspptsspsqrsyspqdwlrgyqsqpqewdywvedvegsippdlqgtlyrngpgllei
gdrplkhpfdgdgmvtafkfpgdgrvhfqskfvrtqgyveeqkagkmiyrgvfgsqpagg
wlktifdlrlkniananitywgdrllalweggqphrlepsnlatiglddlggilaegqpl
sahpridpastfdggqpcyvtfsiksslsstltlleldpqgkllrqktetfpgfafihdf
aitphyaiflqnnvtlnglpylfglrgagecvqfhpdkpaqiilvprdggeikripvqag
fvfhhanafeengkiildsicynslpqvdtdgdfrstnfdnldpgqlwrftidpaaatve
kqlmvsrccefpvvhpqqvgrpyryvymgaahhstgnaplqailkvdlesgtetlrsfap
hgfagepifvprpggvaeddgwllcliykadlhrselvildaqditapaiatlklkhhip
yplhgswaqt

    Sequence, based on observed residues (ATOM records): (download) 
    >5kk0B (B:)
psqrsyspqdwlrgyqsqpqewdywvedvegsippdlqgtlyrngpglleigdrplkhpf
dgdgmvtafkfpgdgrvhfqskfvrtqgyveeqkagkmiyrgvfgsqpaggwlktifdlr
lkniananitywgdrllalweggqphrlepsnlatiglddlggilaegqplsahpridpa
stfdggqpcyvtfsiksslsstltlleldpqgkllrqktetfpgfafihdfaitphyaif
lqnnvtlnglpylfglrgagecvqfhpdkpaqiilvprdggeikripvqagfvfhhanaf
eengkiildsicynslpqvdtdgdfrstnfdnldpgqlwrftidpaaatvekqlmvsrcc
efpvvhpqqvgrpyryvymgaahhstgnaplqailkvdlesgtetlrsfaphgfagepif
vprpggvaeddgwllcliykadlhrselvildaqditapaiatlklkhhipyplhgswaq
t

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5kk0C (C:)
mvtspptsspsqrsyspqdwlrgyqsqpqewdywvedvegsippdlqgtlyrngpgllei
gdrplkhpfdgdgmvtafkfpgdgrvhfqskfvrtqgyveeqkagkmiyrgvfgsqpagg
wlktifdlrlkniananitywgdrllalweggqphrlepsnlatiglddlggilaegqpl
sahpridpastfdggqpcyvtfsiksslsstltlleldpqgkllrqktetfpgfafihdf
aitphyaiflqnnvtlnglpylfglrgagecvqfhpdkpaqiilvprdggeikripvqag
fvfhhanafeengkiildsicynslpqvdtdgdfrstnfdnldpgqlwrftidpaaatve
kqlmvsrccefpvvhpqqvgrpyryvymgaahhstgnaplqailkvdlesgtetlrsfap
hgfagepifvprpggvaeddgwllcliykadlhrselvildaqditapaiatlklkhhip
yplhgswaqt

    Sequence, based on observed residues (ATOM records): (download) 
    >5kk0C (C:)
qrsyspqdwlrgyqsqpqewdywvedvegsippdlqgtlyrngpglleigdrplkhpfdg
dgmvtafkfpgdgrvhfqskfvrtqgyveeqkagkmiyrgvfgsqpaggwlktifdlrlk
niananitywgdrllalweggqphrlepsnlatiglddlggilaegqplsahpridpast
fdggqpcyvtfsiksslsstltlleldpqgkllrqktetfpgfafihdfaitphyaiflq
nnvtlnglpylfglrgagecvqfhpdkpaqiilvprdggeikripvqagfvfhhanafee
ngkiildsicynslpqvdtdgdfrstnfdnldpgqlwrftidpaaatvekqlmvsrccef
pvvhpqqvgrpyryvymgaahhstgnaplqailkvdlesgtetlrsfaphgfagepifvp
rpggvaeddgwllcliykadlhrselvildaqditapaiatlklkhhipyplhgswaqt

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5kk0D (D:)
mvtspptsspsqrsyspqdwlrgyqsqpqewdywvedvegsippdlqgtlyrngpgllei
gdrplkhpfdgdgmvtafkfpgdgrvhfqskfvrtqgyveeqkagkmiyrgvfgsqpagg
wlktifdlrlkniananitywgdrllalweggqphrlepsnlatiglddlggilaegqpl
sahpridpastfdggqpcyvtfsiksslsstltlleldpqgkllrqktetfpgfafihdf
aitphyaiflqnnvtlnglpylfglrgagecvqfhpdkpaqiilvprdggeikripvqag
fvfhhanafeengkiildsicynslpqvdtdgdfrstnfdnldpgqlwrftidpaaatve
kqlmvsrccefpvvhpqqvgrpyryvymgaahhstgnaplqailkvdlesgtetlrsfap
hgfagepifvprpggvaeddgwllcliykadlhrselvildaqditapaiatlklkhhip
yplhgswaqt

    Sequence, based on observed residues (ATOM records): (download) 
    >5kk0D (D:)
qrsyspqdwlrgyqsqpqewdywvedvegsippdlqgtlyrngpglleigdrplkhpfdg
dgmvtafkfpgdgrvhfqskfvrtqgyveeqkagkmiyrgvfgsqpaggwlktifdlrlk
niananitywgdrllalweggqphrlepsnlatiglddlggilaegqplsahpridpast
fdggqpcyvtfsiksslsstltlleldpqgkllrqktetfpgfafihdfaitphyaiflq
nnvtlnglpylfglrgagecvqfhpdkpaqiilvprdggeikripvqagfvfhhanafee
ngkiildsicynslpqvdtdgdfrstnfdnldpgqlwrftidpaaatvekqlmvsrccef
pvvhpqqvgrpyryvymgaahhstgnaplqailkvdlesgtetlrsfaphgfagepifvp
rpggvaeddgwllcliykadlhrselvildaqditapaiatlklkhhipyplhgswaqt