PDB entry 5khp

View 5khp on RCSB PDB site
Description: Tightening the Recognition of Tetravalent Zr and Th Complexes by the Siderophore-Binding Mammalian Protein Siderocalin for Theranostic Applications
Class: metal binding protein
Keywords: Siderophore-Binding, NGAL, METAL BINDING PROTEIN
Deposited on 2016-06-15, released 2017-04-26
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-09-27, with a file datestamp of 2017-09-22.
Experiment type: XRAY
Resolution: 2.65 Å
R-factor: N/A
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Neutrophil gelatinase-associated lipocalin
    Species: Homo sapiens [TaxId:9606]
    Gene: LCN2, HNL, NGAL
    Database cross-references and differences (RAF-indexed):
    • Uniprot P80188
      • conflict (88)
    Domains in SCOPe 2.08: d5khpa_
  • Chain 'B':
    Compound: Neutrophil gelatinase-associated lipocalin
    Species: Homo sapiens [TaxId:9606]
    Gene: LCN2, HNL, NGAL
    Database cross-references and differences (RAF-indexed):
    • Uniprot P80188
      • conflict (88)
    Domains in SCOPe 2.08: d5khpb_
  • Chain 'C':
    Compound: Neutrophil gelatinase-associated lipocalin
    Species: Homo sapiens [TaxId:9606]
    Gene: LCN2, HNL, NGAL
    Database cross-references and differences (RAF-indexed):
    • Uniprot P80188
      • conflict (88)
    Domains in SCOPe 2.08: d5khpc_
  • Heterogens: ZR, 7K9, SO4, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5khpA (A:)
gsqdstsdlipapplskvplqqnfqdnqfqgkwyvvglagnailredkdpqkmyatiyel
kedksynvtsvlfrkkkcdywirtfvpgsqpgeftlgniksypgltsylvrvvstnynqh
amvffkkvsqnreyfkitlygrtkeltselkenfirfskslglpenhivfpvpidqcidg

    Sequence, based on observed residues (ATOM records): (download) 
    >5khpA (A:)
sdlipapplskvplqqnfqdnqfqgkwyvvglagnailredkdpqkmyatiyelkedksy
nvtsvlfrkkkcdywirtfvpgsqpgeftlgniksypgltsylvrvvstnynqhamvffk
kvsqnreyfkitlygrtkeltselkenfirfskslglpenhivfpvpidqcid

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5khpB (B:)
gsqdstsdlipapplskvplqqnfqdnqfqgkwyvvglagnailredkdpqkmyatiyel
kedksynvtsvlfrkkkcdywirtfvpgsqpgeftlgniksypgltsylvrvvstnynqh
amvffkkvsqnreyfkitlygrtkeltselkenfirfskslglpenhivfpvpidqcidg

    Sequence, based on observed residues (ATOM records): (download) 
    >5khpB (B:)
dlipapplskvplqqnfqdnqfqgkwyvvglagnailredkdpqkmyatiyelkedksyn
vtsvlfrkkkcdywirtfvpgsqpgeftlgniksypgltsylvrvvstnynqhamvffkk
vsqnreyfkitlygrtkeltselkenfirfskslglpenhivfpvpidqci

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5khpC (C:)
gsqdstsdlipapplskvplqqnfqdnqfqgkwyvvglagnailredkdpqkmyatiyel
kedksynvtsvlfrkkkcdywirtfvpgsqpgeftlgniksypgltsylvrvvstnynqh
amvffkkvsqnreyfkitlygrtkeltselkenfirfskslglpenhivfpvpidqcidg

    Sequence, based on observed residues (ATOM records): (download) 
    >5khpC (C:)
sdlipapplskvplqqnfqdnqfqgkwyvvglagnailredkdpqkmyatiyelkedksy
nvtsvlfrkkkcdywirtfvpgsqpgeftlgniksypgltsylvrvvstnynqhamvffk
kvsqnreyfkitlygrtkeltselkenfirfskslglpenhivfpvpidqcid