PDB entry 5jr8
View 5jr8 on RCSB PDB site
Description: Disposal of Iron by a Mutant form of Siderocalin NGAL
Class: Siderophore binding protein
Keywords: Fe-Siderophore binding protein mutant, Siderophore binding protein
Deposited on
2016-05-05, released
2016-09-28
The last revision prior to the SCOPe 2.08 freeze date was dated
2016-11-16, with a file datestamp of
2016-11-11.
Experiment type: XRAY
Resolution: 2.65 Å
R-factor: N/A
AEROSPACI score: 0.19
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Neutrophil gelatinase-associated lipocalin
Species: Homo sapiens [TaxId:9606]
Gene: LCN2, HNL, NGAL
Database cross-references and differences (RAF-indexed):
- Uniprot P80188 (Start-177)
- conflict (14)
- conflict (45)
- conflict (73-74)
- conflict (97)
- conflict (117)
- conflict (129)
- conflict (148)
- conflict (164)
Domains in SCOPe 2.08: d5jr8a_ - Chain 'B':
Compound: Neutrophil gelatinase-associated lipocalin
Species: Homo sapiens [TaxId:9606]
Gene: LCN2, HNL, NGAL
Database cross-references and differences (RAF-indexed):
- Uniprot P80188
- conflict (14)
- conflict (45)
- conflict (72-74)
- conflict (97)
- conflict (117)
- conflict (129)
- conflict (148)
- conflict (164)
Domains in SCOPe 2.08: d5jr8b_ - Heterogens: PO4, GOL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5jr8A (A:)
qdstsdlipapplssvplqqnfqdnqfqgkwyvvglagnailrededpqkmyatiyelke
dksynvtsvlfrddgcdywirtfvpgcqpgeftlgniqsypgltsylvrvvstnynqfam
vffkkvsqnqeyfkitlygrtkeltselqenfirfskslglpennivfpvpidqcidg
Sequence, based on observed residues (ATOM records): (download)
>5jr8A (A:)
dlipapplssvplqqnfqdnqfqgkwyvvglagnailrededpqkmyatiyelkedksyn
vtsvlfrdgcdywirtfvpgcqpgeftlgniqsypgltsylvrvvstnynqfamvffkkv
sqnqeyfkitlygrtkeltselqenfirfskslglpennivfpvpidqcidg
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5jr8B (B:)
qdstsdlipapplssvplqqnfqdnqfqgkwyvvglagnailrededpqkmyatiyelke
dksynvtsvlfrddgcdywirtfvpgcqpgeftlgniqsypgltsylvrvvstnynqfam
vffkkvsqnqeyfkitlygrtkeltselqenfirfskslglpennivfpvpidqcidg
Sequence, based on observed residues (ATOM records): (download)
>5jr8B (B:)
sdlipapplssvplqqnfqdnqfqgkwyvvglagnailrededpqkmyatiyelkedksy
nvtsvlfrddgcdywirtfvpgcqpgeftlgniqsypgltsylvrvvstnynqfamvffk
kvsqnqeyfkitlygrtkeltselqenfirfskslglpennivfpvpidqcid