PDB entry 5i5m

View 5i5m on RCSB PDB site
Description: Shewanella denitrificans nitrous oxide reductase, Ca2+-reconstituted form
Class: oxidoreductase
Keywords: nitrogen cycle nitrous oxide reductase beta-propeller apoprotein, oxidoreductase
Deposited on 2016-02-15, released 2016-03-02
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-09-06, with a file datestamp of 2017-09-01.
Experiment type: XRAY
Resolution: 1.37 Å
R-factor: N/A
AEROSPACI score: 0.55 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: nitrous-oxide reductase
    Species: Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) [TaxId:318161]
    Gene: nosZ, Sden_2219
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q12M27 (Start-627)
      • expression tag (628)
    Domains in SCOPe 2.07: d5i5ma1, d5i5ma2, d5i5ma3
  • Chain 'B':
    Compound: nitrous-oxide reductase
    Species: Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) [TaxId:318161]
    Gene: nosZ, Sden_2219
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q12M27 (Start-627)
      • expression tag (628)
    Domains in SCOPe 2.07: d5i5mb1, d5i5mb2, d5i5mb3
  • Heterogens: CA, BU3, SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5i5mA (A:)
msensenkslelqdssrrsfmgrsaligagavaapmtaamfasmakaqtqtqgasavvhp
geldeyygfwsgghsgevrilgipsmrelmripvfnidsatgwgitneskrikgdsahlm
tgdshhphmsmtdgsyngkyvfindkansrvarircdvmktdkmitipnvqaihglrvqk
vpytkyvicngefeipmnndgkasledvstyrslfnvidaekmevafqvmvdgnldntda
dydgkyffstcynsemgmnlgemitaerdhvvvfslerclaalkagkftnyngnkvpvld
grkgsdltryipvpksphgintapdgkyfvangklsptvsvveiarlddvfsgkiqprda
ivaepelglgplhtafdnkgnafttlfldsqiakwniqdaikayngekvnylrqkldvhy
qpghnhtsqgetrdtdgkwlvvlckfskdrflpvgplrpendqlidisgdemklvhdgpt
faephdcmivhrskvkpqklwtrddpmfadtvamakqdgvtlemdnkvirdgnkvrvymt
siapnfgmnefkvklgdevtvvvtnldqvedvthgfcmtnhgvqmevapqatasvtfian
kpgvqwyycnwfchalhmemrgrmlvealewshpqfek

    Sequence, based on observed residues (ATOM records): (download) 
    >5i5mA (A:)
savvhpgeldeyygfwsgghsgevrilgipsmrelmripvfnidsatgwgitneskrikg
dsahlmtgdshhphmsmtdgsyngkyvfindkansrvarircdvmktdkmitipnvqaih
glrvqkvpytkyvicngefeipmnndgkasledvstyrslfnvidaekmevafqvmvdgn
ldntdadydgkyffstcynsemgmnlgemitaerdhvvvfslerclaalkagkftnyngn
kvpvldgrkgsdltryipvpksphgintapdgkyfvangklsptvsvveiarlddvfsgk
iqprdaivaepelglgplhtafdnkgnafttlfldsqiakwniqdaikayngekvnylrq
kldvhyqpghnhtsqgetrdtdgkwlvvlckfskdrflpvgplrpendqlidisgdemkl
vhdgptfaephdcmivhrskvkpqklwtrddpmfadtvamakqdgvtlemdnkvirdgnk
vrvymtsiapnfgmnefkvklgdevtvvvtnldqvedvthgfcmtnhgvqmevapqatas
vtfiankpgvqwyycnwfchalhmemrgrmlveal

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5i5mB (B:)
msensenkslelqdssrrsfmgrsaligagavaapmtaamfasmakaqtqtqgasavvhp
geldeyygfwsgghsgevrilgipsmrelmripvfnidsatgwgitneskrikgdsahlm
tgdshhphmsmtdgsyngkyvfindkansrvarircdvmktdkmitipnvqaihglrvqk
vpytkyvicngefeipmnndgkasledvstyrslfnvidaekmevafqvmvdgnldntda
dydgkyffstcynsemgmnlgemitaerdhvvvfslerclaalkagkftnyngnkvpvld
grkgsdltryipvpksphgintapdgkyfvangklsptvsvveiarlddvfsgkiqprda
ivaepelglgplhtafdnkgnafttlfldsqiakwniqdaikayngekvnylrqkldvhy
qpghnhtsqgetrdtdgkwlvvlckfskdrflpvgplrpendqlidisgdemklvhdgpt
faephdcmivhrskvkpqklwtrddpmfadtvamakqdgvtlemdnkvirdgnkvrvymt
siapnfgmnefkvklgdevtvvvtnldqvedvthgfcmtnhgvqmevapqatasvtfian
kpgvqwyycnwfchalhmemrgrmlvealewshpqfek

    Sequence, based on observed residues (ATOM records): (download) 
    >5i5mB (B:)
asavvhpgeldeyygfwsgghsgevrilgipsmrelmripvfnidsatgwgitneskrik
gdsahlmtgdshhphmsmtdgsyngkyvfindkansrvarircdvmktdkmitipnvqai
hglrvqkvpytkyvicngefeipmnndgkasledvstyrslfnvidaekmevafqvmvdg
nldntdadydgkyffstcynsemgmnlgemitaerdhvvvfslerclaalkagkftnyng
nkvpvldgrkgsdltryipvpksphgintapdgkyfvangklsptvsvveiarlddvfsg
kiqprdaivaepelglgplhtafdnkgnafttlfldsqiakwniqdaikayngekvnylr
qkldvhyqpghnhtsqgetrdtdgkwlvvlckfskdrflpvgplrpendqlidisgdemk
lvhdgptfaephdcmivhrskvkpqklwtrddpmfadtvamakqdgvtlemdnkvirdgn
kvrvymtsiapnfgmnefkvklgdevtvvvtnldqvedvthgfcmtnhgvqmevapqata
svtfiankpgvqwyycnwfchalhmemrgrmlveal