PDB entry 5gyr

View 5gyr on RCSB PDB site
Description: Tetrameric Allochromatium vinosum cytochrome c'
Class: electron transport
Keywords: electron transport
Deposited on 2016-09-23, released 2017-02-08
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-03-08, with a file datestamp of 2017-03-03.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: N/A
AEROSPACI score: 0.45 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: cytochrome c'
    Species: Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / NCIMB 10441 / D) [TaxId:572477]
    Gene: cycA, Alvin_2765
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5gyra_
  • Chain 'B':
    Compound: cytochrome c'
    Species: Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / NCIMB 10441 / D) [TaxId:572477]
    Gene: cycA, Alvin_2765
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5gyrb_
  • Chain 'E':
    Compound: cytochrome c'
    Species: Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / NCIMB 10441 / D) [TaxId:572477]
    Gene: cycA, Alvin_2765
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5gyre_
  • Chain 'F':
    Compound: cytochrome c'
    Species: Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / NCIMB 10441 / D) [TaxId:572477]
    Gene: cycA, Alvin_2765
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5gyrf_
  • Chain 'I':
    Compound: cytochrome c'
    Species: Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / NCIMB 10441 / D) [TaxId:572477]
    Gene: cycA, Alvin_2765
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5gyri_
  • Chain 'J':
    Compound: cytochrome c'
    Species: Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / NCIMB 10441 / D) [TaxId:572477]
    Gene: cycA, Alvin_2765
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5gyrj_
  • Chain 'M':
    Compound: cytochrome c'
    Species: Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / NCIMB 10441 / D) [TaxId:572477]
    Gene: cycA, Alvin_2765
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5gyrm_
  • Chain 'N':
    Compound: cytochrome c'
    Species: Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / NCIMB 10441 / D) [TaxId:572477]
    Gene: cycA, Alvin_2765
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5gyrn_
  • Heterogens: HEM, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >5gyrA (A:)
aglspeeqietrqagyefmgwnmgkikanlegeynaaqveaaanviaaiansgmgalygp
gtdknvgdvktrvkpeffqnmedvgkiarefvgaantlaevaatgeaeavktafgdvgaa
ckschekyrak

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >5gyrB (B:)
aglspeeqietrqagyefmgwnmgkikanlegeynaaqveaaanviaaiansgmgalygp
gtdknvgdvktrvkpeffqnmedvgkiarefvgaantlaevaatgeaeavktafgdvgaa
ckschekyrak

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >5gyrE (E:)
aglspeeqietrqagyefmgwnmgkikanlegeynaaqveaaanviaaiansgmgalygp
gtdknvgdvktrvkpeffqnmedvgkiarefvgaantlaevaatgeaeavktafgdvgaa
ckschekyrak

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >5gyrF (F:)
aglspeeqietrqagyefmgwnmgkikanlegeynaaqveaaanviaaiansgmgalygp
gtdknvgdvktrvkpeffqnmedvgkiarefvgaantlaevaatgeaeavktafgdvgaa
ckschekyrak

  • Chain 'I':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >5gyrI (I:)
aglspeeqietrqagyefmgwnmgkikanlegeynaaqveaaanviaaiansgmgalygp
gtdknvgdvktrvkpeffqnmedvgkiarefvgaantlaevaatgeaeavktafgdvgaa
ckschekyrak

  • Chain 'J':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >5gyrJ (J:)
aglspeeqietrqagyefmgwnmgkikanlegeynaaqveaaanviaaiansgmgalygp
gtdknvgdvktrvkpeffqnmedvgkiarefvgaantlaevaatgeaeavktafgdvgaa
ckschekyrak

  • Chain 'M':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >5gyrM (M:)
aglspeeqietrqagyefmgwnmgkikanlegeynaaqveaaanviaaiansgmgalygp
gtdknvgdvktrvkpeffqnmedvgkiarefvgaantlaevaatgeaeavktafgdvgaa
ckschekyrak

  • Chain 'N':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >5gyrN (N:)
aglspeeqietrqagyefmgwnmgkikanlegeynaaqveaaanviaaiansgmgalygp
gtdknvgdvktrvkpeffqnmedvgkiarefvgaantlaevaatgeaeavktafgdvgaa
ckschekyrak