PDB entry 5cfc
View 5cfc on RCSB PDB site
Description: Crystal Structure of Human Cardiovirus SAFV-3
Class: virus
Keywords: Virion, capsid, saffold virus, pathogen, virus
Deposited on
2015-07-08, released
2016-06-15
The last revision prior to the SCOPe 2.06 freeze date was dated
2016-06-15, with a file datestamp of
2016-06-10.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.2
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Genome polyprotein,VP1
Species: SAFFOLD VIRUS [TaxId:434309]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5cfca_ - Chain 'B':
Compound: Genome polyprotein, VP3
Species: SAFFOLD VIRUS [TaxId:434309]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5cfcb_ - Chain 'C':
Compound: Genome polyprotein
Species: SAFFOLD VIRUS [TaxId:434309]
Database cross-references and differences (RAF-indexed):
- Chain 'D':
Compound: vp4
Species: Saffold virus [TaxId:434409]
Database cross-references and differences (RAF-indexed):
- Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>5cfcA (A:)
gvdnaekgkvsddnastdfvaepvklpenqtrvsffydrstlssvlqstsdvsskftpst
aknlqnsilltplpsdivnnsvlpeqerwisfaspttqkppyktkqdwnfimfspftyyk
cdlevtlskndretissvvryvpcgapsdlsdqtmpqtpsladtrdphmwvvgqgttnqi
sfvipytsplsvlpsvwfngfsnfdnssrfgvapnadfgrlllqgqgtfsvhyrykkmrv
fcprptvfipwp
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>5cfcB (B:)
spfpvtvrehagtffsttpdttvpvygntistpfdymcgeftdllslckiptflgnldsn
kkripyfsatnstpatplvtyqvtlscscmansmlaavarnfnqyrgslnylfvftgsam
tkgkflisytppgagepktldqamqatyaiwdlglnssynftvpfispthyrqtsyntpt
itsvdgwltvwqltpltyplgvpndshiltlvsggddftlrmpvtftkyvpq
- Chain 'C':
No sequence available.
- Chain 'D':
No sequence available.