PDB entry 5c4d

View 5c4d on RCSB PDB site
Description: Crystal structure of GTB + UDP-Glc + DI
Class: transferase
Keywords: Glycosyltransferase Deoxyinhibitor ABO(H) Blood-Group System Complex, TRANSFERASE
Deposited on 2015-06-18, released 2015-09-23
The last revision prior to the SCOPe 2.05 freeze date was dated 2015-09-23, with a file datestamp of 2015-09-18.
Experiment type: XRAY
Resolution: 1.4 Å
R-factor: N/A
AEROSPACI score: 0.53 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Histo-blood group ABO system transferase
    Species: Homo sapiens [TaxId:9606]
    Gene: ABO
    Database cross-references and differences (RAF-indexed):
    • Uniprot P16442 (6-End)
      • expression tag (4-5)
      • engineered mutation (118)
      • engineered mutation (177)
      • engineered mutation (208)
      • engineered mutation (210)
    Domains in SCOPe 2.05: d5c4da_
  • Heterogens: MN, DA8, UPG, PG0, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5c4dA (A:)
aigefmvslprmvypqpkvltpcrkdvlvvtpwlapivwegtfnidilneqfrlqnttig
ltvfaikkyvaflklfletaekhfmvghrvhyyvftdqpaavprvtlgtgrqlsvlevga
ykrwqdvsmrrmemisdfcerrflsevdylvcvdvdmefrdhvgveiltplfgtlhpsfy
gssreaftyerrpqsqayipkdegdfyymgaffggsvqevqrltrachqammvdqangie
avwhdeshlnkyllrhkptkvlspeylwdqqllgwpavlrklrftavpknhqavrnpe

    Sequence, based on observed residues (ATOM records): (download) 
    >5c4dA (A:)
fmvslprmvypqpkvltpcrkdvlvvtpwlapivwegtfnidilneqfrlqnttigltvf
aikkyvaflklfletaekhfmvghrvhyyvftdqpaavprvtlgtgrqlsvlevgaysmr
rmemisdfcerrflsevdylvcvdvdmefrdhvgveiltplfgtlhpsfygssreaftye
rrpqsqayipkdegdfyymgaffggsvqevqrltrachqammvdqangieavwhdeshln
kyllrhkptkvlspeylwdqqllgwpavlrklrftavpk