PDB entry 5c47

View 5c47 on RCSB PDB site
Description: Crystal structure of ABBB + UDP-C-Gal (long soak) + DI
Class: transferase
Keywords: Human ABO(H) glycosyltransferases Non-hydrolyzable substrate analogs Chimeric enzyme, TRANSFERASE
Deposited on 2015-06-17, released 2015-09-23
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-01-08, with a file datestamp of 2020-01-03.
Experiment type: XRAY
Resolution: 1.39 Å
R-factor: N/A
AEROSPACI score: 0.54 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Histo-blood group ABO system transferase
    Species: Homo sapiens [TaxId:9606]
    Gene: ABO
    Database cross-references and differences (RAF-indexed):
    • Uniprot P16442 (6-End)
      • expression tag (0-5)
      • engineered mutation (177)
      • engineered mutation (208)
      • engineered mutation (210)
    Domains in SCOPe 2.08: d5c47a1, d5c47a2
  • Heterogens: MN, DA8, PG0, URM, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5c47A (A:)
aigefmvslprmvypqpkvltpcrkdvlvvtpwlapivwegtfnidilneqfrlqnttig
ltvfaikkyvaflklfletaekhfmvghrvhyyvftdqpaavprvtlgtgrqlsvlevra
ykrwqdvsmrrmemisdfcerrflsevdylvcvdvdmefrdhvgveiltplfgtlhpsfy
gssreaftyerrpqsqayipkdegdfyymgaffggsvqevqrltrachqammvdqangie
avwhdeshlnkyllrhkptkvlspeylwdqqllgwpavlrklrftavpknhqavrnpe

    Sequence, based on observed residues (ATOM records): (download) 
    >5c47A (A:)
aigefmvslprmvypqpkvltpcrkdvlvvtpwlapivwegtfnidilneqfrlqnttig
ltvfaikkyvaflklfletaekhfmvghrvhyyvftdqpaavprvtlgtgrqlsvlevra
ywqdvsmrrmemisdfcerrflsevdylvcvdvdmefrdhvgveiltplfgtlhpsfygs
sreaftyerrpqsqayipkdegdfyymgaffggsvqevqrltrachqammvdqangieav
whdeshlnkyllrhkptkvlspeylwdqqllgwpavlrklrftavpkn