PDB entry 4yq5
View 4yq5 on RCSB PDB site
Description: Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds
Class: transferase/transferase inhibitor
Keywords: TrmD, SAM-binding, knot, transferase-transferase inhibitor complex
Deposited on
2015-03-13, released
2016-03-16
The last revision prior to the SCOPe 2.06 freeze date was dated
2016-03-16, with a file datestamp of
2016-03-11.
Experiment type: XRAY
Resolution: 1.76 Å
R-factor: N/A
AEROSPACI score: 0.39
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: tRNA (guanine-N(1)-)-methyltransferase
Species: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) [TaxId:71421]
Gene: trmD, HI_0202
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4yq5a1, d4yq5a2 - Heterogens: 4G0, FLC, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4yq5A (A:)
glvprgshmwigvislfpemfkaitefgvtgravkhnllkvecwnprdftfdkhktvddr
pygggpgmlmmvqplrdaihtakaaagegakviylspqgrkldqggvtelaqnqklilvc
gryegiderliqteideewsigdyvltggelpamtlidavarfipgvlgkqasaeedsfa
dglldcphytrpevlegltvppvlmsghheeirkwrlkqslqrtwlrrpelleglaltde
qrkllkeaqaehns
Sequence, based on observed residues (ATOM records): (download)
>4yq5A (A:)
lvprgshmwigvislfpemfkaitefgvtgravkhnllkvecwnprdftfdkhktvddrp
ygggpgmlmmvqplrdaihtakaaagegakviylspqgrkldqggvtelaqnqklilvcg
ryegiderliqteideewsigdyvltggelpamtlidavarfipgvlgsfadglldcphy
trpevlegltvppvlmsghheeirkwrlkqslqrtwlrrpelleglaltdeqrkllkeaq
aehns