PDB entry 4wzt

View 4wzt on RCSB PDB site
Description: Crystal structure of P domain from norovirus strain NSW0514 in complex with HBGA type A (triglycan)
Class: viral protein
Keywords: Viral capsid protein, Protruding domain, viral protein
Deposited on 2014-11-20, released 2014-12-17
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-06-29.
Experiment type: XRAY
Resolution: 1.91 Å
R-factor: N/A
AEROSPACI score: 0.42 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: vp1
    Species: Norovirus Hu/GII.4/Sydney/NSW0514/2012/AU [TaxId:1241973]
    Database cross-references and differences (RAF-indexed):
    • Uniprot K4LM89 (1-306)
      • expression tag (0)
    Domains in SCOPe 2.08: d4wzta1, d4wzta2
  • Chain 'B':
    Compound: vp1
    Species: Norovirus Hu/GII.4/Sydney/NSW0514/2012/AU [TaxId:1241973]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4wztb_
  • Heterogens: EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4wztA (A:)
skpfsvpvltveemtnsrfpipleklftgpssafvvqpqngrcttdgvllgttqlspvni
ctfrgdvthitgsrnytmnlasqnwndydpteeipaplgtpdfvgkiqgvltqttrtdgs
trghkatvytgsadfapklgrvqfetdtdrdfeanqntkftpvgviqdggtthrnepqqw
vlpsysgrnthnvhlapavaptfpgeqllffrstmpgcsgypnmdldcllpqewvqyfyq
eaapaqsdvallrfvnpdtgrvlfecklhksgyvtvahtgqhdlvippngyfrfdswvnq
fytlapm

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4wztB (B:)
skpfsvpvltveemtnsrfpipleklftgpssafvvqpqngrcttdgvllgttqlspvni
ctfrgdvthitgsrnytmnlasqnwndydpteeipaplgtpdfvgkiqgvltqttrtdgs
trghkatvytgsadfapklgrvqfetdtdrdfeanqntkftpvgviqdggtthrnepqqw
vlpsysgrnthnvhlapavaptfpgeqllffrstmpgcsgypnmdldcllpqewvqyfyq
eaapaqsdvallrfvnpdtgrvlfecklhksgyvtvahtgqhdlvippngyfrfdswvnq
fytlapm

    Sequence, based on observed residues (ATOM records): (download) 
    >4wztB (B:)
kpfsvpvltveemtnsrfpipleklftgpssafvvqpqngrcttdgvllgttqlspvnic
tfrgdvthitgsrnytmnlasqnwndydpteeipaplgtpdfvgkiqgvltqttrtdgst
rghkatvytgsadfapklgrvqfetdtdrdfeanqntkftpvgviqdggtthrnepqqwv
lpsysgrnthnvhlapavaptfpgeqllffrstmpgcsgypnmdldcllpqewvqyfyqe
aapaqsdvallrfvnpdtgrvlfecklhksgyvtvahtgqhdlvippngyfrfdswvnqf
ytlapm