PDB entry 4r1p

View 4r1p on RCSB PDB site
Description: Crystal Structure of Thermophilic L-Arabinose with Mn2+ from Geobacillus kaustophilus
Class: Isomerase
Keywords: Hexamer, Themophile, Thermostable, AI fold, Isomerase
Deposited on 2014-08-07, released 2015-08-12
The last revision prior to the SCOPe 2.05 freeze date was dated 2015-08-12, with a file datestamp of 2015-08-07.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: L-arabinose isomerase
    Species: GEOBACILLUS KAUSTOPHILUS HTA426 [TaxId:235909]
    Gene: araA, GK1904
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4r1pa1, d4r1pa2
  • Chain 'B':
    Compound: L-arabinose isomerase
    Species: GEOBACILLUS KAUSTOPHILUS HTA426 [TaxId:235909]
    Gene: araA, GK1904
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4r1pb1, d4r1pb2
  • Chain 'C':
    Compound: L-arabinose isomerase
    Species: GEOBACILLUS KAUSTOPHILUS HTA426 [TaxId:235909]
    Gene: araA, GK1904
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4r1pc1, d4r1pc2
  • Chain 'D':
    Compound: L-arabinose isomerase
    Species: GEOBACILLUS KAUSTOPHILUS HTA426 [TaxId:235909]
    Gene: araA, GK1904
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4r1pd1, d4r1pd2
  • Chain 'E':
    Compound: L-arabinose isomerase
    Species: GEOBACILLUS KAUSTOPHILUS HTA426 [TaxId:235909]
    Gene: araA, GK1904
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4r1pe1, d4r1pe2
  • Chain 'F':
    Compound: L-arabinose isomerase
    Species: GEOBACILLUS KAUSTOPHILUS HTA426 [TaxId:235909]
    Gene: araA, GK1904
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4r1pf1, d4r1pf2
  • Heterogens: MN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4r1pA (A:)
mmlslrpyefwfvtgsqhlygeealkqveehsrimvnewnrdsvfpfpfvfksvvttpee
irrvcleanaseqcagvvtwmhtfspakmwiggllelrkpllhlhtqfnrdipwdsidmd
fmnlnqsahgdreygfigarmgvarkvvvghwedpevrerlakwmrtavafaesrnlkva
rfgdnmrevavtegdkvgaqiqfgwsvngygigdlvqyirdvseqkvnelldeyeelydi
vpagrqegpvresireqarielglkaflqdgnftaftttfedlhgmkqlpglavqrlmae
gygfggegdwktaalvrlmkvmadgkgtsfmedytyhfepgnelilgahmlevcptiaat
rprvevhplsiggkedparlvfdggegaavnaslidlghrfrlivnevdavkpehdmpkl
pvarilwkprpslrdsaeawilaggahhtcfsfavtteqlqdfaemagiecvvinehtsv
ssfknelkwnevfwrgr

    Sequence, based on observed residues (ATOM records): (download) 
    >4r1pA (A:)
lslrpyefwfvtgsqhlygeealkqveehsrimvnewnrdsvfpfpfvfksvvttpeeir
rvcleanaseqcagvvtwmhtfspakmwiggllelrkpllhlhtqfnrdipwdsidmdfm
nlnqsahgdreygfigarmgvarkvvvghwedpevrerlakwmrtavafaesrnlkvarf
gdnmrevavtegdkvgaqiqfgwsvngygigdlvqyirdvseqkvnelldeyeelydivp
agrqegpvresireqarielglkaflqdgnftaftttfedlhgmkqlpglavqrlmaegy
gfggegdwktaalvrlmkvmadgkgtsfmedytyhfepgnelilgahmlevcptiaatrp
rvevhplsiggkedparlvfdggegaavnaslidlghrfrlivnevdavkpehdmpklpv
arilwkprpslrdsaeawilaggahhtcfsfavtteqlqdfaemagiecvvinehtsvss
fknelkwnevfwrg

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4r1pB (B:)
mmlslrpyefwfvtgsqhlygeealkqveehsrimvnewnrdsvfpfpfvfksvvttpee
irrvcleanaseqcagvvtwmhtfspakmwiggllelrkpllhlhtqfnrdipwdsidmd
fmnlnqsahgdreygfigarmgvarkvvvghwedpevrerlakwmrtavafaesrnlkva
rfgdnmrevavtegdkvgaqiqfgwsvngygigdlvqyirdvseqkvnelldeyeelydi
vpagrqegpvresireqarielglkaflqdgnftaftttfedlhgmkqlpglavqrlmae
gygfggegdwktaalvrlmkvmadgkgtsfmedytyhfepgnelilgahmlevcptiaat
rprvevhplsiggkedparlvfdggegaavnaslidlghrfrlivnevdavkpehdmpkl
pvarilwkprpslrdsaeawilaggahhtcfsfavtteqlqdfaemagiecvvinehtsv
ssfknelkwnevfwrgr

    Sequence, based on observed residues (ATOM records): (download) 
    >4r1pB (B:)
lslrpyefwfvtgsqhlygeealkqveehsrimvnewnrdsvfpfpfvfksvvttpeeir
rvcleanaseqcagvvtwmhtfspakmwiggllelrkpllhlhtqfnrdipwdsidmdfm
nlnqsahgdreygfigarmgvarkvvvghwedpevrerlakwmrtavafaesrnlkvarf
gdnmrevavtegdkvgaqiqfgwsvngygigdlvqyirdvseqkvnelldeyeelydivp
agrqegpvresireqarielglkaflqdgnftaftttfedlhgmkqlpglavqrlmaegy
gfggegdwktaalvrlmkvmadgkgtsfmedytyhfepgnelilgahmlevcptiaatrp
rvevhplsiggkedparlvfdggegaavnaslidlghrfrlivnevdavkpehdmpklpv
arilwkprpslrdsaeawilaggahhtcfsfavtteqlqdfaemagiecvvinehtsvss
fknelkwnevfw

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4r1pC (C:)
mmlslrpyefwfvtgsqhlygeealkqveehsrimvnewnrdsvfpfpfvfksvvttpee
irrvcleanaseqcagvvtwmhtfspakmwiggllelrkpllhlhtqfnrdipwdsidmd
fmnlnqsahgdreygfigarmgvarkvvvghwedpevrerlakwmrtavafaesrnlkva
rfgdnmrevavtegdkvgaqiqfgwsvngygigdlvqyirdvseqkvnelldeyeelydi
vpagrqegpvresireqarielglkaflqdgnftaftttfedlhgmkqlpglavqrlmae
gygfggegdwktaalvrlmkvmadgkgtsfmedytyhfepgnelilgahmlevcptiaat
rprvevhplsiggkedparlvfdggegaavnaslidlghrfrlivnevdavkpehdmpkl
pvarilwkprpslrdsaeawilaggahhtcfsfavtteqlqdfaemagiecvvinehtsv
ssfknelkwnevfwrgr

    Sequence, based on observed residues (ATOM records): (download) 
    >4r1pC (C:)
mlslrpyefwfvtgsqhlygeealkqveehsrimvnewnrdsvfpfpfvfksvvttpeei
rrvcleanaseqcagvvtwmhtfspakmwiggllelrkpllhlhtqfnrdipwdsidmdf
mnlnqsahgdreygfigarmgvarkvvvghwedpevrerlakwmrtavafaesrnlkvar
fgdnmrevavtegdkvgaqiqfgwsvngygigdlvqyirdvseqkvnelldeyeelydiv
pagrqegpvresireqarielglkaflqdgnftaftttfedlhgmkqlpglavqrlmaeg
ygfggegdwktaalvrlmkvmadgkgtsfmedytyhfepgnelilgahmlevcptiaatr
prvevhplsiggkedparlvfdggegaavnaslidlghrfrlivnevdavkpehdmpklp
varilwkprpslrdsaeawilaggahhtcfsfavtteqlqdfaemagiecvvinehtsvs
sfknelkwnevfwrg

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4r1pD (D:)
mmlslrpyefwfvtgsqhlygeealkqveehsrimvnewnrdsvfpfpfvfksvvttpee
irrvcleanaseqcagvvtwmhtfspakmwiggllelrkpllhlhtqfnrdipwdsidmd
fmnlnqsahgdreygfigarmgvarkvvvghwedpevrerlakwmrtavafaesrnlkva
rfgdnmrevavtegdkvgaqiqfgwsvngygigdlvqyirdvseqkvnelldeyeelydi
vpagrqegpvresireqarielglkaflqdgnftaftttfedlhgmkqlpglavqrlmae
gygfggegdwktaalvrlmkvmadgkgtsfmedytyhfepgnelilgahmlevcptiaat
rprvevhplsiggkedparlvfdggegaavnaslidlghrfrlivnevdavkpehdmpkl
pvarilwkprpslrdsaeawilaggahhtcfsfavtteqlqdfaemagiecvvinehtsv
ssfknelkwnevfwrgr

    Sequence, based on observed residues (ATOM records): (download) 
    >4r1pD (D:)
lslrpyefwfvtgsqhlygeealkqveehsrimvnewnrdsvfpfpfvfksvvttpeeir
rvcleanaseqcagvvtwmhtfspakmwiggllelrkpllhlhtqfnrdipwdsidmdfm
nlnqsahgdreygfigarmgvarkvvvghwedpevrerlakwmrtavafaesrnlkvarf
gdnmrevavtegdkvgaqiqfgwsvngygigdlvqyirdvseqkvnelldeyeelydivp
agrqegpvresireqarielglkaflqdgnftaftttfedlhgmkqlpglavqrlmaegy
gfggegdwktaalvrlmkvmadgkgtsfmedytyhfepgnelilgahmlevcptiaatrp
rvevhplsiggkedparlvfdggegaavnaslidlghrfrlivnevdavkpehdmpklpv
arilwkprpslrdsaeawilaggahhtcfsfavtteqlqdfaemagiecvvinehtsvss
fknelkwnevfwrg

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >4r1pE (E:)
mmlslrpyefwfvtgsqhlygeealkqveehsrimvnewnrdsvfpfpfvfksvvttpee
irrvcleanaseqcagvvtwmhtfspakmwiggllelrkpllhlhtqfnrdipwdsidmd
fmnlnqsahgdreygfigarmgvarkvvvghwedpevrerlakwmrtavafaesrnlkva
rfgdnmrevavtegdkvgaqiqfgwsvngygigdlvqyirdvseqkvnelldeyeelydi
vpagrqegpvresireqarielglkaflqdgnftaftttfedlhgmkqlpglavqrlmae
gygfggegdwktaalvrlmkvmadgkgtsfmedytyhfepgnelilgahmlevcptiaat
rprvevhplsiggkedparlvfdggegaavnaslidlghrfrlivnevdavkpehdmpkl
pvarilwkprpslrdsaeawilaggahhtcfsfavtteqlqdfaemagiecvvinehtsv
ssfknelkwnevfwrgr

    Sequence, based on observed residues (ATOM records): (download) 
    >4r1pE (E:)
mlslrpyefwfvtgsqhlygeealkqveehsrimvnewnrdsvfpfpfvfksvvttpeei
rrvcleanaseqcagvvtwmhtfspakmwiggllelrkpllhlhtqfnrdipwdsidmdf
mnlnqsahgdreygfigarmgvarkvvvghwedpevrerlakwmrtavafaesrnlkvar
fgdnmrevavtegdkvgaqiqfgwsvngygigdlvqyirdvseqkvnelldeyeelydiv
pagrqegpvresireqarielglkaflqdgnftaftttfedlhgmkqlpglavqrlmaeg
ygfggegdwktaalvrlmkvmadgkgtsfmedytyhfepgnelilgahmlevcptiaatr
prvevhplsiggkedparlvfdggegaavnaslidlghrfrlivnevdavkpehdmpklp
varilwkprpslrdsaeawilaggahhtcfsfavtteqlqdfaemagiecvvinehtsvs
sfknelkwnevfwrg

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >4r1pF (F:)
mmlslrpyefwfvtgsqhlygeealkqveehsrimvnewnrdsvfpfpfvfksvvttpee
irrvcleanaseqcagvvtwmhtfspakmwiggllelrkpllhlhtqfnrdipwdsidmd
fmnlnqsahgdreygfigarmgvarkvvvghwedpevrerlakwmrtavafaesrnlkva
rfgdnmrevavtegdkvgaqiqfgwsvngygigdlvqyirdvseqkvnelldeyeelydi
vpagrqegpvresireqarielglkaflqdgnftaftttfedlhgmkqlpglavqrlmae
gygfggegdwktaalvrlmkvmadgkgtsfmedytyhfepgnelilgahmlevcptiaat
rprvevhplsiggkedparlvfdggegaavnaslidlghrfrlivnevdavkpehdmpkl
pvarilwkprpslrdsaeawilaggahhtcfsfavtteqlqdfaemagiecvvinehtsv
ssfknelkwnevfwrgr

    Sequence, based on observed residues (ATOM records): (download) 
    >4r1pF (F:)
lrpyefwfvtgsqhlygeealkqveehsrimvnewnrdsvfpfpfvfksvvttpeeirrv
cleanaseqcagvvtwmhtfspakmwiggllelrkpllhlhtqfnrdipwdsidmdfmnl
nqsahgdreygfigarmgvarkvvvghwedpevrerlakwmrtavafaesrnlkvarfgd
nmrevavtegdkvgaqiqfgwsvngygigdlvqyirdvseqkvnelldeyeelydivpag
rqegpvresireqarielglkaflqdgnftaftttfedlhgmkqlpglavqrlmaegygf
ggegdwktaalvrlmkvmadgkgtsfmedytyhfepgnelilgahmlevcptiaatrprv
evhplsiggkedparlvfdggegaavnaslidlghrfrlivnevdavkpehdmpklpvar
ilwkprpslrdsaeawilaggahhtcfsfavtteqlqdfaemagiecvvinehtsvssfk
nelkwnevfwrg