PDB entry 4qnp
View 4qnp on RCSB PDB site
Description: Crystal structure of the 2009 pandemic H1N1 influenza virus neuraminidase with a neutralizing antibody
Class: hydrolase/immune system
Keywords: influenza, neuraminidase, antibody, neutralizing antibody, HYDROLASE-IMMUNE SYSTEM complex
Deposited on
2014-06-18, released
2015-02-11
The last revision prior to the SCOPe 2.05 freeze date was dated
2015-02-25, with a file datestamp of
2015-02-20.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.183
AEROSPACI score: 0.22
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Neuraminidase
Species: Influenza A virus [TaxId:11320]
Gene: NA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d4qnpa_ - Chain 'B':
Compound: Neuraminidase
Species: Influenza A virus [TaxId:11320]
Gene: NA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d4qnpb_ - Chain 'E':
Compound: neutralizing antibody, heavy chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Chain 'F':
Compound: neutralizing antibody, light chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d4qnpf1, d4qnpf2 - Chain 'H':
Compound: neutralizing antibody, heavy chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Chain 'L':
Compound: neutralizing antibody, light chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d4qnpl1, d4qnpl2 - Heterogens: NAG, CA, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>4qnpA (A:)
svklagnsslcpvsgwaiyskdnsvrigskgdvfvirepfiscsplecrtffltqgalln
dkhsngtikdrspyrtlmscpigevpspynsrfesvawsasachdginwltigisgpdng
avavlkyngiitdtikswrnnilrtqesecacvngscftvmtdgpsngqasykifriekg
kivksvemnapnyhyeecscypdsseitcvcrdnwhgsnrpwvsfnqnleyqigyicsgi
fgdnprpndktgscgpvssngangvkgfsfkygngvwigrtksissrngfemiwdpngwt
gtdnnfsikqdivginewsgysgsfvqhpeltgldcirpcfwvelirgrpkentiwtsgs
sisfcgvnsdtvgwswpdgaelpfti
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>4qnpB (B:)
svklagnsslcpvsgwaiyskdnsvrigskgdvfvirepfiscsplecrtffltqgalln
dkhsngtikdrspyrtlmscpigevpspynsrfesvawsasachdginwltigisgpdng
avavlkyngiitdtikswrnnilrtqesecacvngscftvmtdgpsngqasykifriekg
kivksvemnapnyhyeecscypdsseitcvcrdnwhgsnrpwvsfnqnleyqigyicsgi
fgdnprpndktgscgpvssngangvkgfsfkygngvwigrtksissrngfemiwdpngwt
gtdnnfsikqdivginewsgysgsfvqhpeltgldcirpcfwvelirgrpkentiwtsgs
sisfcgvnsdtvgwswpdgaelpfti
- Chain 'E':
No sequence available.
- Chain 'F':
Sequence; same for both SEQRES and ATOM records: (download)
>4qnpF (F:)
qivlsqspailsaspgekvtmtcrtsssvsymhwyqqkpgsspkpwiyatsnlasgvpfr
fsgsgsgtsysltisrveaedaatyycqqwnsnpptfgggtkleikradaaptvsifpps
seqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstltl
tkdeyerhnsytceathktstspivksfnrne
- Chain 'H':
No sequence available.
- Chain 'L':
Sequence, based on SEQRES records: (download)
>4qnpL (L:)
qivlsqspailsaspgekvtmtcrtsssvsymhwyqqkpgsspkpwiyatsnlasgvpfr
fsgsgsgtsysltisrveaedaatyycqqwnsnpptfgggtkleikradaaptvsifpps
seqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstltl
tkdeyerhnsytceathktstspivksfnrne
Sequence, based on observed residues (ATOM records): (download)
>4qnpL (L:)
qivlsqspailsaspgekvtmtcrtsssvsymhwyqqkpgsspkpwiyatsnlasgvpfr
fsgsgsgtsysltisrveaedaatyycqqwnsnpptfgggtkleikradaaptvsifpps
seqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstltl
tkdeyerhnsytceathktstspivksfnrn