PDB entry 4pbr
View 4pbr on RCSB PDB site
Description: Crystal structure of the M. jannaschii G2 tRNA synthetase variant bound to 4-(2-bromoisobutyramido)-phenylalanine (BibaF)
Class: ligase
Keywords: tRNA synthetase, non-natural amino acid, LIGASE
Deposited on
2014-04-13, released
2014-07-23
The last revision prior to the SCOPe 2.05 freeze date was dated
2014-10-01, with a file datestamp of
2014-09-26.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.197
AEROSPACI score: 0.39
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Tyrosine--tRNA ligase
Species: Methanocaldococcus jannaschii [TaxId:243232]
Gene: tyrS, MJ0389
Database cross-references and differences (RAF-indexed):
- Uniprot Q57834 (0-305)
- engineered mutation (31)
- engineered mutation (64)
- engineered mutation (107-108)
- engineered mutation (157)
- engineered mutation (161)
- expression tag (306-309)
Domains in SCOPe 2.05: d4pbra_ - Heterogens: 2L7, PEG, GOL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4pbrA (A:)
mdefemikrntseiiseeelrevlkkdeksagigfepsgkihlghylqikkmidlqnagf
diiieladlhaylnqkgeldeirkigdynkkvfeamglkakyvygsewmldkdytlnvyr
lalkttlkrarrsmeliaredenpkvaeviypimqvnsihykgvdvavggmeqrkihmla
rellpkkvvcihnpvltgldgegkmssskgnfiavddspeeirakikkaycpagvvegnp
imeiakyfleypltikrpekfggdltvnsyeeleslfknkelhpmdlknavaeelikile
pirkrllehhhhhh
Sequence, based on observed residues (ATOM records): (download)
>4pbrA (A:)
mdefemikrntseiiseeelrevlkkdeksagigfepsgkihlghylqikkmidlqnagf
diiieladlhaylnqkgeldeirkigdynkkvfeamglkakyvygsewmldkdytlnvyr
lalkttlkrarrsmeliaredenpkvaeviypimqvnsihykgvdvavggmeqrkihmla
rellpkkvvcihnpvltgldgegkmssskgnfiavddspeeirakikkaycpagvvegnp
imeiakyfleypltikrpekfggdltvnsyeeleslfknkelhpmdlknavaeelikile
pirkrllehh