PDB entry 4odu
View 4odu on RCSB PDB site
Description: Unliganded Fab structure of lipid A-specific antibody S1-15
Class: immune system
Keywords: Carbohydrate binding, IMMUNE SYSTEM
Deposited on
2014-01-10, released
2015-06-24
The last revision prior to the SCOPe 2.06 freeze date was dated
2015-10-07, with a file datestamp of
2015-10-02.
Experiment type: XRAY
Resolution: 2.29 Å
R-factor: N/A
AEROSPACI score: 0.24
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: S1-15 Fab (IgG2b) heavy chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Chain 'B':
Compound: S1-15 Fab (IgG2b kappa) light chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4odub1, d4odub2 - Chain 'H':
Compound: S1-15 Fab (IgG2b) heavy chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Chain 'L':
Compound: S1-15 Fab (IgG2b kappa) light chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4odul1, d4odul2 - Heterogens: SO4, HOH
PDB Chain Sequences:
- Chain 'A':
No sequence available.
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4oduB (B:)
diqmtqstsslsaslgdrvtiscrasqdisnylnwyqqkpdgtvkvliyytsrlrsgvps
rfsgsgsgtdysltisnleqediatyfcqqgntlpwtfgggtkleikradaaptvsifpp
sseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstlt
ltkdeyerhnsytceathktstspivksfnrnec
Sequence, based on observed residues (ATOM records): (download)
>4oduB (B:)
diqmtqstsslsaslgdrvtiscrasqdisnylnwyqqkpdgtvkvliyytsrlrsgvps
rfsgsgsgtdysltisnleqediatyfcqqgntlpwtfgggtkleikradaaptvsifpp
sseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstlt
ltkdeyerhnsytceathktstspivksfnrn
- Chain 'H':
No sequence available.
- Chain 'L':
Sequence, based on SEQRES records: (download)
>4oduL (L:)
diqmtqstsslsaslgdrvtiscrasqdisnylnwyqqkpdgtvkvliyytsrlrsgvps
rfsgsgsgtdysltisnleqediatyfcqqgntlpwtfgggtkleikradaaptvsifpp
sseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstlt
ltkdeyerhnsytceathktstspivksfnrnec
Sequence, based on observed residues (ATOM records): (download)
>4oduL (L:)
diqmtqstsslsaslgdrvtiscrasqdisnylnwyqqkpdgtvkvliyytsrlrsgvps
rfsgsgsgtdysltisnleqediatyfcqqgntlpwtfgggtkleikradaaptvsifpp
sseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstlt
ltkdeyerhnsytceathktstspivksfnrn