PDB entry 4o58
View 4o58 on RCSB PDB site
Description: Crystal structure of broadly neutralizing antibody F045-092 in complex with A/Victoria/3/1975 (H3N2) influenza hemagglutinin
Class: viral protein/immune system
Keywords: immunoglobulin, virus attachment and entry, immune recognition, VIRAL PROTEIN-IMMUNE SYSTEM complex
Deposited on
2013-12-19, released
2014-04-16
The last revision prior to the SCOPe 2.04 freeze date was dated
2014-05-14, with a file datestamp of
2014-05-09.
Experiment type: XRAY
Resolution: 2.75 Å
R-factor: 0.18
AEROSPACI score: 0.24
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Hemagglutinin HA1 chain
Species: Influenza A virus [TaxId:392809]
Gene: HA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d4o58a_ - Chain 'B':
Compound: Hemagglutinin HA2 chain
Species: Influenza A virus [TaxId:392809]
Gene: HA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d4o58b_ - Chain 'H':
Compound: Fab F045-092 heavy chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- PDB 4O58 (0-End)
- Uniprot S6C4S0
- Chain 'L':
Compound: Fab F045-092 light chain
Species: Homo sapiens [TaxId:9606]
Gene: IGL@, IGLC2
Database cross-references and differences (RAF-indexed):
- PDB 4O58 (0-115)
- Uniprot P0CG05 (116-End)
Domains in SCOPe 2.04: d4o58l1, d4o58l2 - Heterogens: NAG, SO4, PEG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4o58A (A:)
adpgatlclghhavpngtlvktitndqievtnatelvqssstgkicnnphrildginctl
idallgdphcdgfqnekwdlfverskafsncypydvpdyaslrslvassgtlefinegfn
wtgvtqnggssackrgpdsgffsrlnwlyksgstypvqnvtmpnndnsdklyiwgvhhps
tdkeqtnlyvqasgkvtvstkrsqqtiipnvgsrpwvrglssrisiywtivkpgdilvin
sngnliaprgyfkmrtgkssimrsdapigtcssecitpngsipndkpfqnvnkitygacp
kyvkqntlklatgmrnvpekqtr
Sequence, based on observed residues (ATOM records): (download)
>4o58A (A:)
pgatlclghhavpngtlvktitndqievtnatelvqssstgkicnnphrildginctlid
allgdphcdgfqnekwdlfverskafsncypydvpdyaslrslvassgtlefinegfnwt
gvtqnggssackrgpdsgffsrlnwlyksgstypvqnvtmpnndnsdklyiwgvhhpstd
keqtnlyvqasgkvtvstkrsqqtiipnvgsrpwvrglssrisiywtivkpgdilvinsn
gnliaprgyfkmrtgkssimrsdapigtcssecitpngsipndkpfqnvnkitygacpky
vkqntlklatgmrnvpe
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4o58B (B:)
gifgaiagfiengwegmidgwygfrhqnsegtgqaadlkstqaaidqingklnrviektn
ekfhqiekefsevegriqdlekyvedtkidlwsynaellvalenqhtidltdsemnklfe
ktrrqlrenaedmgngcfkiyhkcdnacigsirngtydhdvyrdealnnrfqikgv
Sequence, based on observed residues (ATOM records): (download)
>4o58B (B:)
gifgaiagfiengwegmidgwygfrhqnsegtgqaadlkstqaaidqingklnrviektn
ekfhqiekefsevegriqdlekyvedtkidlwsynaellvalenqhtidltdsemnklfe
ktrrqlrenaedmgngcfkiyhkcdnacigsirngtydhdvyrdealnnrfq
- Chain 'H':
No sequence available.
- Chain 'L':
Sequence, based on SEQRES records: (download)
>4o58L (L:)
qsvltqppsasgtpgqsvtiscsgsrsniggntvnwyqhlpgmapklliyssnqrssgvp
drfsgsksgtsaslaisglqseddadyycaswddslngvvfgggtkltvlgqpkaapsvt
lfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaass
ylsltpeqwkshrsyscqvthegstvektvaptecs
Sequence, based on observed residues (ATOM records): (download)
>4o58L (L:)
qsvltqppsasgtpgqsvtiscsgsrsniggntvnwyqhlpgmapklliyssnqrssgvp
drfsgsksgtsaslaisglqseddadyycaswddslngvvfgggtkltvlgqpkaapsvt
lfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaass
ylsltpeqwkshrsyscqvthegstvektvapt