PDB entry 4lgr

View 4lgr on RCSB PDB site
Description: Ricin A chain bound to camelid nanobody (VHH3)
Class: hydrolase/immune system
Keywords: Ribosome inhibiting protein 2, HYDROLASE-IMMUNE SYSTEM complex
Deposited on 2013-06-28, released 2014-06-11
The last revision prior to the SCOPe 2.06 freeze date was dated 2014-08-20, with a file datestamp of 2014-08-15.
Experiment type: XRAY
Resolution: 1.65 Å
R-factor: 0.181
AEROSPACI score: 0.5 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ricin
    Species: Ricinus communis [TaxId:3988]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4lgra_
  • Chain 'B':
    Compound: Camelid nanobody (VHH3)
    Species: Camelidae [TaxId:9835]
    Database cross-references and differences (RAF-indexed):
    • PDB 4LGR (0-121)
  • Heterogens: ZN, ACY, CL, EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4lgrA (A:)
qypiinfttagatvqsytnfiravrgrlttgadvrheipvlpnrvglpinqrfilvelsn
haelsvtlaldvtnayvvgyragnsayffhpdnqedaeaithlftdvqnrytfafggnyd
rleqlagnlrenielgngpleeaisalyyystggtqlptlarsfiiciqmiseaarfqyi
egemrtrirynrrsapdpsvitlenswgrlstaiqesnqgafaspiqlqrrngskfsvyd
vsilipiialmvyrc

    Sequence, based on observed residues (ATOM records): (download) 
    >4lgrA (A:)
qypiinfttagatvqsytnfiravrgrltadvrheipvlpnrvglpinqrfilvelsnha
elsvtlaldvtnayvvgyragnsayffhpdnqedaeaithlftdvqnrytfafggnydrl
eqlagnlrenielgngpleeaisalyyystggtqlptlarsfiiciqmiseaarfqyieg
emrtrirynrrsapdpsvitlenswgrlstaiqesnqgafaspiqlqrrngskfsvydvs
ilipiialmvyrc

  • Chain 'B':
    No sequence available.