PDB entry 4kn5

View 4kn5 on RCSB PDB site
Description: Crystal structure of a putative methylthioadenosine nucleosidase from Weissella paramesenteroides ATCC 33313 (Target NYSGRC-029342 )
Class: hydrolase
Keywords: 5'-methylthioadenosine nucleosidase, Structural genomics, NYSGRC, New York Structural Genomics Research Consortium, PSI-Biology, HYDROLASE
Deposited on 2013-05-08, released 2013-05-29
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-11-15, with a file datestamp of 2017-11-10.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: N/A
AEROSPACI score: 0.41 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Methylthioadenosine nucleosidase
    Species: Weissella paramesenteroides [TaxId:585506]
    Gene: HMPREF0877_0999
    Database cross-references and differences (RAF-indexed):
    • Uniprot C5RAK4 (23-252)
      • expression tag (18-22)
    Domains in SCOPe 2.07: d4kn5a1, d4kn5a2
  • Chain 'B':
    Compound: Methylthioadenosine nucleosidase
    Species: Weissella paramesenteroides [TaxId:585506]
    Gene: HMPREF0877_0999
    Database cross-references and differences (RAF-indexed):
    • Uniprot C5RAK4 (23-252)
      • expression tag (22)
    Domains in SCOPe 2.07: d4kn5b1, d4kn5b2
  • Heterogens: EDO, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4kn5A (A:)
mhhhhhhssgvdlgtenlyfqsmrygvinamaeekaalvdamidekkttiagklfhhgki
ghvdvvvvesgigkvasaltttllitnfgvdavinsgsagalgtdlrigdiviadylaya
dadarafgyaygqvpqqparfkadtdlsndlsesyekvtdarlvrglvvtsdsfiasneq
kqtilthfpeaqsaemegasiaqvanyfdvpfavvraisdnangeagmtfddfiveagqq
saqvlinffeaqa

    Sequence, based on observed residues (ATOM records): (download) 
    >4kn5A (A:)
yfqsmrygvinamaeekaalvdamidekkttiagklfhhgkighvdvvvvesgigkvasa
ltttllitnfgvdavinsgsagalgtdlrigdiviadylayadadarafgyaygqvpqqp
arfkadtdlsndlsesyekvtdarlvrglvvtsdsfiasneqkqtilthfpeaqsaemeg
asiaqvanyfdvpfavvraisdnangeagmtfddfiveagqqsaqvlinffeaqa

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4kn5B (B:)
mhhhhhhssgvdlgtenlyfqsmrygvinamaeekaalvdamidekkttiagklfhhgki
ghvdvvvvesgigkvasaltttllitnfgvdavinsgsagalgtdlrigdiviadylaya
dadarafgyaygqvpqqparfkadtdlsndlsesyekvtdarlvrglvvtsdsfiasneq
kqtilthfpeaqsaemegasiaqvanyfdvpfavvraisdnangeagmtfddfiveagqq
saqvlinffeaqa

    Sequence, based on observed residues (ATOM records): (download) 
    >4kn5B (B:)
mrygvinamaeekaalvdamidekkttiagklfhhgkighvdvvvvesgigkvasalttt
llitnfgvdavinsgsagalgtdlrigdiviadylayadadarafgyaygqvpqqparfk
adtdlsndlsesyekvtdarlvrglvvtsdsfiasneqkqtilthfpeaqsaemegasia
qvanyfdvpfavvraisdnangfddfiveagqqsaqvlinffeaqa