PDB entry 4j6x

View 4j6x on RCSB PDB site
Description: Crystal structure of Hfq from Pseudomonas aeruginosa in complex with UTP
Class: RNA binding protein
Keywords: LSM, RNA binding protein, RNA chaperone, sRNA, mRNA
Deposited on 2013-02-12, released 2013-07-31
The last revision prior to the SCOPe 2.08 freeze date was dated 2013-08-21, with a file datestamp of 2013-08-16.
Experiment type: XRAY
Resolution: 2.22 Å
R-factor: 0.186
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Protein hfq
    Species: Pseudomonas aeruginosa [TaxId:208964]
    Gene: hfq, PA4944
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4j6xa_
  • Chain 'B':
    Compound: Protein hfq
    Species: Pseudomonas aeruginosa [TaxId:208964]
    Gene: hfq, PA4944
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4j6xb_
  • Chain 'C':
    Compound: Protein hfq
    Species: Pseudomonas aeruginosa [TaxId:208964]
    Gene: hfq, PA4944
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4j6xc_
  • Chain 'D':
    Compound: Protein hfq
    Species: Pseudomonas aeruginosa [TaxId:208964]
    Gene: hfq, PA4944
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4j6xd_
  • Chain 'E':
    Compound: Protein hfq
    Species: Pseudomonas aeruginosa [TaxId:208964]
    Gene: hfq, PA4944
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4j6xe_
  • Chain 'F':
    Compound: Protein hfq
    Species: Pseudomonas aeruginosa [TaxId:208964]
    Gene: hfq, PA4944
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4j6xf_
  • Heterogens: UTP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4j6xA (A:)
mskghslqdpylntlrkervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvpsrpvrlpsgdqpaepgna

    Sequence, based on observed residues (ATOM records): (download) 
    >4j6xA (A:)
slqdpylntlrkervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvps
rpvrlp

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4j6xB (B:)
mskghslqdpylntlrkervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvpsrpvrlpsgdqpaepgna

    Sequence, based on observed residues (ATOM records): (download) 
    >4j6xB (B:)
hslqdpylntlrkervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvp
srpvrlp

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4j6xC (C:)
mskghslqdpylntlrkervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvpsrpvrlpsgdqpaepgna

    Sequence, based on observed residues (ATOM records): (download) 
    >4j6xC (C:)
slqdpylntlrkervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvps
rpvrlp

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4j6xD (D:)
mskghslqdpylntlrkervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvpsrpvrlpsgdqpaepgna

    Sequence, based on observed residues (ATOM records): (download) 
    >4j6xD (D:)
hslqdpylntlrkervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvp
srpvrl

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >4j6xE (E:)
mskghslqdpylntlrkervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvpsrpvrlpsgdqpaepgna

    Sequence, based on observed residues (ATOM records): (download) 
    >4j6xE (E:)
ghslqdpylntlrkervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvv
psrpvrlp

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >4j6xF (F:)
mskghslqdpylntlrkervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvpsrpvrlpsgdqpaepgna

    Sequence, based on observed residues (ATOM records): (download) 
    >4j6xF (F:)
kghslqdpylntlrkervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistv
vpsrpvrl