PDB entry 4j6p
View 4j6p on RCSB PDB site
Description: Crystal structure of calcium2+-free wild-type CD23 lectin domain (crystal form F)
Class: immune system
Keywords: immunoglobulin fold lectin, antibody receptor, immune system
Deposited on
2013-02-11, released
2013-08-28
The last revision prior to the SCOPe 2.03 freeze date was dated
2013-08-28, with a file datestamp of
2013-08-23.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.187
AEROSPACI score: 0.47
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Low affinity immunoglobulin epsilon Fc receptor
Species: Homo sapiens [TaxId:9606]
Gene: CD23A, CLEC4J, FCE2, FCER2, IGEBF
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d4j6pa_ - Chain 'B':
Compound: Low affinity immunoglobulin epsilon Fc receptor
Species: Homo sapiens [TaxId:9606]
Gene: CD23A, CLEC4J, FCE2, FCER2, IGEBF
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d4j6pb_ - Chain 'C':
Compound: Low affinity immunoglobulin epsilon Fc receptor
Species: Homo sapiens [TaxId:9606]
Gene: CD23A, CLEC4J, FCE2, FCER2, IGEBF
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d4j6pc_ - Chain 'D':
Compound: Low affinity immunoglobulin epsilon Fc receptor
Species: Homo sapiens [TaxId:9606]
Gene: CD23A, CLEC4J, FCE2, FCER2, IGEBF
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d4j6pd_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4j6pA (A:)
sgfvcntcpekwinfqrkcyyfgkgtkqwvharyacddmegqlvsihspeeqdfltkhas
htgswiglrnldlkgefiwvdgshvdysnwapgeptsrsqgedcvmmrgsgrwndafcdr
klgawvcdrlatctppasegsae
Sequence, based on observed residues (ATOM records): (download)
>4j6pA (A:)
vcntcpekwinfqrkcyyfgkgtkqwvharyacddmegqlvsihspeeqdfltkhashtg
swiglrnldlkgefiwvdgshvdysnwapgepgedcvmmrgsgrwndafcdrklgawvcd
rlatctpp
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4j6pB (B:)
sgfvcntcpekwinfqrkcyyfgkgtkqwvharyacddmegqlvsihspeeqdfltkhas
htgswiglrnldlkgefiwvdgshvdysnwapgeptsrsqgedcvmmrgsgrwndafcdr
klgawvcdrlatctppasegsae
Sequence, based on observed residues (ATOM records): (download)
>4j6pB (B:)
fvcntcpekwinfqrkcyyfgkgtkqwvharyacddmegqlvsihspeeqdfltkhasht
gswiglrnldlkgefiwvdgshvdysnwapgeptqgedcvmmrgsgrwndafcdrklgaw
vcdrlatctp
- Chain 'C':
Sequence, based on SEQRES records: (download)
>4j6pC (C:)
sgfvcntcpekwinfqrkcyyfgkgtkqwvharyacddmegqlvsihspeeqdfltkhas
htgswiglrnldlkgefiwvdgshvdysnwapgeptsrsqgedcvmmrgsgrwndafcdr
klgawvcdrlatctppasegsae
Sequence, based on observed residues (ATOM records): (download)
>4j6pC (C:)
fvcntcpekwinfqrkcyyfgkgtkqwvharyacddmegqlvsihspeeqdfltkhasht
gswiglrnldlkgefiwvdgshvdysnwapgeptsrsqgedcvmmrgsgrwndafcdrkl
gawvcdrlatctppa
- Chain 'D':
Sequence, based on SEQRES records: (download)
>4j6pD (D:)
sgfvcntcpekwinfqrkcyyfgkgtkqwvharyacddmegqlvsihspeeqdfltkhas
htgswiglrnldlkgefiwvdgshvdysnwapgeptsrsqgedcvmmrgsgrwndafcdr
klgawvcdrlatctppasegsae
Sequence, based on observed residues (ATOM records): (download)
>4j6pD (D:)
sgfvcntcpekwinfqrkcyyfgkgtkqwvharyacddmegqlvsihspeeqdfltkhas
htgswiglrnldlkgefiwvdgshvdysnwapgeptsrsqgedcvmmrgsgrwndafcdr
klgawvcdrlatc