PDB entry 4j6g
View 4j6g on RCSB PDB site
Description: CRYSTAL STRUCTURE OF LIGHT AND DcR3 COMPLEX
Class: immune system
Keywords: LIGHT, DCR3, TNF, TNFR, TNF14, STRUCTURAL GENOMICS, PSI-BIOLOGY, NEW HVEM, N-GLYCOSYLATION, MEMBRANE, SECRETED PROTEIN, CYTOKINE, IFN, JELLY-ROLL FOLD, BIND TNF RECEPTOR HVEM AND LTBR, LTBR, Protein Structure Initiative, Atoms-to-Animals: The Immune Function Network, New York Structural Genomics Research Consortium, NYSGRC, IMMUNE SYSTEM
Deposited on
2013-02-11, released
2013-03-13
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-07-29, with a file datestamp of
2020-07-04.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: N/A
AEROSPACI score: 0.29
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Tumor necrosis factor ligand superfamily member 14
Species: Homo sapiens [TaxId:9606]
Gene: TNFSF14, HVEML, LIGHT, UNQ391/PRO726
Database cross-references and differences (RAF-indexed):
- Uniprot O43557 (Start-164)
- engineered mutation (138)
Domains in SCOPe 2.08: d4j6ga_ - Chain 'B':
Compound: Tumor necrosis factor ligand superfamily member 14
Species: Homo sapiens [TaxId:9606]
Gene: TNFSF14, HVEML, LIGHT, UNQ391/PRO726
Database cross-references and differences (RAF-indexed):
- Uniprot O43557 (Start-164)
- engineered mutation (138)
Domains in SCOPe 2.08: d4j6gb_ - Chain 'C':
Compound: Tumor necrosis factor receptor superfamily member 6B
Species: Homo sapiens [TaxId:9606]
Gene: TNFRSF6B, DCR3, TR6, UNQ186/PRO212
Database cross-references and differences (RAF-indexed):
- Chain 'D':
Compound: Tumor necrosis factor receptor superfamily member 6B
Species: Homo sapiens [TaxId:9606]
Gene: TNFRSF6B, DCR3, TR6, UNQ186/PRO212
Database cross-references and differences (RAF-indexed):
- Heterogens: CL, MG, NAG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4j6gA (A:)
hhhhhhgliqerrshevnpaahltganssltgsggpllwetqlglaflrglsyhdgalvv
tkagyyyiyskvqlggvgcplglastithglykrtprypeelellvsqqspcgratsssr
vwwdssflggvvhleageevvvrvlderlvrlrdgtrsyfgafmv
Sequence, based on observed residues (ATOM records): (download)
>4j6gA (A:)
vnpaahltganssltgsggpllwetqlglaflrglsyhdgalvvtkagyyyiyskvqlgg
vgcastithglykrtprypeelellvsqqspcgrvwwdssflggvvhleageevvvrvld
erlvrlrdgtrsyfgafmv
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4j6gB (B:)
hhhhhhgliqerrshevnpaahltganssltgsggpllwetqlglaflrglsyhdgalvv
tkagyyyiyskvqlggvgcplglastithglykrtprypeelellvsqqspcgratsssr
vwwdssflggvvhleageevvvrvlderlvrlrdgtrsyfgafmv
Sequence, based on observed residues (ATOM records): (download)
>4j6gB (B:)
vnpaahltganssltgsggpllwetqlglaflrglsyhdgalvvtkagyyyiyskvqlgg
vgcastithglykrtprypeelellvsqqspcgrvwwdssflggvvhleageevvvrvld
erlvrlrdgtrsyfgafmv
- Chain 'C':
No sequence available.
- Chain 'D':
No sequence available.