PDB entry 4i9x
View 4i9x on RCSB PDB site
Description: Crystal structure of human cytomegalovirus glycoprotein UL141 targeting the death receptor TRAIL-R2
Class: apoptosis
Keywords: Ig-like domain, APOPTOSIS
Deposited on
2012-12-05, released
2013-04-03
The last revision prior to the SCOPe 2.07 freeze date was dated
2013-04-17, with a file datestamp of
2013-04-12.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.224
AEROSPACI score: 0.37
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Protein UL141
Species: Human herpesvirus 5 [TaxId:295027]
Database cross-references and differences (RAF-indexed):
- Chain 'B':
Compound: Protein UL141
Species: Human herpesvirus 5 [TaxId:295027]
Database cross-references and differences (RAF-indexed):
- Chain 'C':
Compound: Tumor necrosis factor receptor superfamily member 10B
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d4i9xc1, d4i9xc2, d4i9xc3 - Chain 'D':
Compound: Tumor necrosis factor receptor superfamily member 10B
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d4i9xd1, d4i9xd2, d4i9xd3 - Heterogens: NAG, CA, NA, HOH
PDB Chain Sequences:
- Chain 'A':
No sequence available.
- Chain 'B':
No sequence available.
- Chain 'C':
Sequence, based on SEQRES records: (download)
>4i9xC (C:)
qqdlapqqraapqqkrsspseglcppghhisedgrdcisckygqdysthwndllfclrct
rcdsgevelspctttrntvcqceegtfreedspemcrkcrtgcprgmvkvgdctpwsdie
cvhkesg
Sequence, based on observed residues (ATOM records): (download)
>4i9xC (C:)
eglcppghhisedgrdcisckygqdysthwndllfclrctrcdsgevelspctttrntvc
qceegtfreedspemcrkcrtgcprgmvkvgdctpwsdiecvhke
- Chain 'D':
Sequence, based on SEQRES records: (download)
>4i9xD (D:)
qqdlapqqraapqqkrsspseglcppghhisedgrdcisckygqdysthwndllfclrct
rcdsgevelspctttrntvcqceegtfreedspemcrkcrtgcprgmvkvgdctpwsdie
cvhkesg
Sequence, based on observed residues (ATOM records): (download)
>4i9xD (D:)
spseglcppghhisedgrdcisckygqdysthwndllfclrctrcdsgevelspctttrn
tvcqceegtfreedspemcrkcrtgcprgmvkvgdctpwsdiecvhke