PDB entry 4epd

View 4epd on RCSB PDB site
Description: Initial Urease Structure for Radiation Damage Experiment at 300 K
Class: hydrolase
Keywords: alpha-beta barrel, nickel metalloenzyme, hydrolase, radiation damage
Deposited on 2012-04-17, released 2012-08-29
The last revision prior to the SCOPe 2.05 freeze date was dated 2013-01-23, with a file datestamp of 2013-01-18.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: 0.145
AEROSPACI score: 0.59 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Urease subunit gamma
    Species: Enterobacter aerogenes [TaxId:548]
    Gene: ureA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4epda_
  • Chain 'B':
    Compound: urease subunit beta
    Species: Enterobacter aerogenes [TaxId:548]
    Gene: UREB
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4epdb_
  • Chain 'C':
    Compound: urease subunit alpha
    Species: Enterobacter aerogenes [TaxId:548]
    Gene: UREC
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4epdc1, d4epdc2
  • Heterogens: NI, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4epdA (A:)
meltprekdklllftaalvaerrlarglklnypesvalisafimegardgksvaslmeeg
rhvltreqvmegvpemipdiqveatfpdgsklvtvhnpii

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4epdB (B:)
mipgeyhvkpgqialntgratcrvvvenhgdrpiqvgshyhfaevnpalkfdrqqaagyr
lnipagtavrfepgqkrevelvafaghravfgfrgevmgpl

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4epdC (C:)
snisrqayadmfgptvgdkvrladtelwieveddlttygeevkfgggkvirdgmgqgqml
aadcvdlvltnalivdhwgivkadigvkdgrifaigkagnpdiqpnvtipigaateviaa
egkivtaggidthihwicpqqaeealvsgvttmvgggtgpaagthattctpgpwyisrml
qaadslpvnigllgkgnvsqpdalreqvaagviglkihedwgatpaaidcaltvademdi
qvalhsdtlnesgfvedtlaaiggrtihtfhtegaggghapdiitacahpnilpsstnpt
lpytlntidehldmlmvchhldpdiaedvafaesrirretiaaedvlhdlgafsltssds
qamgrvgevilrtwqvahrmkvqrgalaeetgdndnfrvkryiakytinpalthgiahev
gsievgkladlvvwspaffgvkpatvikggmiaiapmgdinasiptpqpvhyrpmfgalg
sarhhcrltflsqaaaangvaerlnlrsaiavvkgcrtvqkadmvhnslqpnitvdaqty
evrvdgelitsepadvlpmaqryflf