PDB entry 4em8

View 4em8 on RCSB PDB site
Description: The Structure of Ribose 5-phosphate Isomerase B from Anaplasma phagocytophilum
Class: isomerase
Keywords: SSGCID, Seattle Structural Genomics Center for Infectious Disease, NIAID, National Institute of Allergy and Infectious Diseases, ISOMERASE
Deposited on 2012-04-11, released 2012-04-25
The last revision prior to the SCOPe 2.07 freeze date was dated 2012-04-25, with a file datestamp of 2012-04-20.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: 0.181
AEROSPACI score: 0.48 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ribose 5-phosphate isomerase B
    Species: Anaplasma phagocytophilum [TaxId:212042]
    Gene: rpiB, APH_0642
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q2GK74 (6-147)
      • expression tag (2-5)
    Domains in SCOPe 2.07: d4em8a1, d4em8a2
  • Chain 'B':
    Compound: Ribose 5-phosphate isomerase B
    Species: Anaplasma phagocytophilum [TaxId:212042]
    Gene: rpiB, APH_0642
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q2GK74 (6-End)
      • expression tag (2-5)
    Domains in SCOPe 2.07: d4em8b1, d4em8b2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4em8A (A:)
gpgsmvvkrvflssdhagvelrlflsaylrdlgcevfdcgcdpkehsvdypdyvhdvvre
vsdtsfgvlicgtgigmsiaanrhkniraalcsstmlaklsrehndanvlcfgsryidpd
taqsvlytfmttaflggrhavrvqklge

    Sequence, based on observed residues (ATOM records): (download) 
    >4em8A (A:)
gsmvvkrvflssdhagvelrlflsaylrdlgcevfdcgcdpkehsvdypdyvhdvvrevs
dtsfgvlicgtgigmsiaanrhkniraalcsstmlaklsrehndanvlcfgsryidpdta
qsvlytfmttaflggrhavrvqklge

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4em8B (B:)
gpgsmvvkrvflssdhagvelrlflsaylrdlgcevfdcgcdpkehsvdypdyvhdvvre
vsdtsfgvlicgtgigmsiaanrhkniraalcsstmlaklsrehndanvlcfgsryidpd
taqsvlytfmttaflggrhavrvqklge

    Sequence, based on observed residues (ATOM records): (download) 
    >4em8B (B:)
gsmvvkrvflssdhagvelrlflsaylrdlgcevfdcgcdpkehsvdypdyvhdvvrevs
dtsfgvlicgtgigmsiaanrhkniraalcsstmlaklsrehndanvlcfgsryidpdta
qsvlytfmttaflggrhavrvqklg