PDB entry 4e38

View 4e38 on RCSB PDB site
Description: Crystal structure of probable keto-hydroxyglutarate-aldolase from Vibrionales bacterium SWAT-3 (Target EFI-502156)
Class: lyase
Keywords: lyase
Deposited on 2012-03-09, released 2012-03-21
The last revision prior to the SCOPe 2.07 freeze date was dated 2012-03-21, with a file datestamp of 2012-03-16.
Experiment type: XRAY
Resolution: 1.64 Å
R-factor: 0.172
AEROSPACI score: 0.59 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase
    Species: Vibrionales bacterium SWAT-3 [TaxId:391574]
    Gene: VSWAT3_13722
    Database cross-references and differences (RAF-indexed):
    • Uniprot A5KUH7 (23-231)
      • expression tag (19-22)
    Domains in SCOPe 2.07: d4e38a1, d4e38a2
  • Chain 'B':
    Compound: Keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase
    Species: Vibrionales bacterium SWAT-3 [TaxId:391574]
    Gene: VSWAT3_13722
    Database cross-references and differences (RAF-indexed):
    • Uniprot A5KUH7 (23-231)
      • expression tag (19-22)
    Domains in SCOPe 2.07: d4e38b1, d4e38b2
  • Chain 'C':
    Compound: Keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase
    Species: Vibrionales bacterium SWAT-3 [TaxId:391574]
    Gene: VSWAT3_13722
    Database cross-references and differences (RAF-indexed):
    • Uniprot A5KUH7 (23-231)
      • expression tag (5-22)
    Domains in SCOPe 2.07: d4e38c1, d4e38c2
  • Heterogens: CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4e38A (A:)
mhhhhhhssgvdlgtenlyfqsmmstinnqlkalkvipviaidnaediiplgkvlaengl
paaeitfrsdaaveairllrqaqpemligagtilngeqalaakeagatfvvspgfnpntv
racqeigidivpgvnnpstveaalemglttlkffpaeasggismvkslvgpygdirlmpt
ggitpsnidnylaipqvlacggtwmvdkklvtngewdeiarltreiveqvnp

    Sequence, based on observed residues (ATOM records): (download) 
    >4e38A (A:)
fqsmmstinnqlkalkvipviaidnaediiplgkvlaenglpaaeitfrsdaaveairll
rqaqpemligagtilngeqalaakeagatfvvspgfnpntvracqeigidivpgvnnpst
veaalemglttlkffpaeasggismvkslvgpygdirlmptggitpsnidnylaipqvla
cggtwmvdkklvtngewdeiarltreiveqvnp

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4e38B (B:)
mhhhhhhssgvdlgtenlyfqsmmstinnqlkalkvipviaidnaediiplgkvlaengl
paaeitfrsdaaveairllrqaqpemligagtilngeqalaakeagatfvvspgfnpntv
racqeigidivpgvnnpstveaalemglttlkffpaeasggismvkslvgpygdirlmpt
ggitpsnidnylaipqvlacggtwmvdkklvtngewdeiarltreiveqvnp

    Sequence, based on observed residues (ATOM records): (download) 
    >4e38B (B:)
fqsmmstinnqlkalkvipviaidnaediiplgkvlaenglpaaeitfrsdaaveairll
rqaqpemligagtilngeqalaakeagatfvvspgfnpntvracqeigidivpgvnnpst
veaalemglttlkffpaeasggismvkslvgpygdirlmptggitpsnidnylaipqvla
cggtwmvdkklvtngewdeiarltreiveqvnp

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4e38C (C:)
mhhhhhhssgvdlgtenlyfqsmmstinnqlkalkvipviaidnaediiplgkvlaengl
paaeitfrsdaaveairllrqaqpemligagtilngeqalaakeagatfvvspgfnpntv
racqeigidivpgvnnpstveaalemglttlkffpaeasggismvkslvgpygdirlmpt
ggitpsnidnylaipqvlacggtwmvdkklvtngewdeiarltreiveqvnp

    Sequence, based on observed residues (ATOM records): (download) 
    >4e38C (C:)
hhssgvdlgtenlyfqsmmstinnqlkalkvipviaidnaediiplgkvlaenglpaaei
tfrsdaaveairllrqaqpemligagtilngeqalaakeagatfvvspgfnpntvracqe
igidivpgvnnpstveaalemglttlkffpaeasggismvkslvgpygdirlmptggitp
snidnylaipqvlacggtwmvdkklvtngewdeiarltreiveqvnp