PDB entry 3wtt
View 3wtt on RCSB PDB site
Description: Crystal structure of the complex comprised of phosphorylated ETS1, RUNX1, CBFBETA, and the tcralpha gene enhancer DNA
Class: transcription/DNA
Keywords: protein-DNA complex, transcription-DNA complex
Deposited on
2014-04-21, released
2014-08-13
The last revision prior to the SCOPe 2.08 freeze date was dated
2017-11-22, with a file datestamp of
2017-11-17.
Experiment type: XRAY
Resolution: 2.35 Å
R-factor: N/A
AEROSPACI score: 0.22
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: runt-related transcription factor 1
Species: Mus musculus [TaxId:10090]
Gene: Aml1, Cbfa2, Pebp2ab, Runx1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3wtta_ - Chain 'B':
Compound: Core-binding factor subunit beta
Species: Mus musculus [TaxId:10090]
Gene: Cbfb, Pebp2b, Pebpb2
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3wttb_ - Chain 'C':
Compound: Protein C-ets-1
Species: Homo sapiens [TaxId:9606]
Gene: ETS1, EWSR2
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3wttc_ - Chain 'D':
Compound: 5'-d(*gp*ap*ap*gp*cp*cp*ap*cp*ap*tp*cp*cp*tp*cp*t)-3'
- Chain 'E':
Compound: 5'-d(*ap*gp*ap*gp*gp*ap*tp*gp*tp*gp*gp*cp*tp*tp*c)-3'
- Chain 'F':
Compound: runt-related transcription factor 1
Species: Mus musculus [TaxId:10090]
Gene: Aml1, Cbfa2, Pebp2ab, Runx1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3wttf_ - Chain 'G':
Compound: Core-binding factor subunit beta
Species: Mus musculus [TaxId:10090]
Gene: Cbfb, Pebp2b, Pebpb2
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3wttg_ - Chain 'H':
Compound: Protein C-ets-1
Species: Homo sapiens [TaxId:9606]
Gene: ETS1, EWSR2
Database cross-references and differences (RAF-indexed):
- Chain 'I':
Compound: 5'-d(*gp*ap*ap*gp*cp*cp*ap*cp*ap*tp*cp*cp*tp*cp*t)-3'
- Chain 'J':
Compound: 5'-d(*ap*gp*ap*gp*gp*ap*tp*gp*tp*gp*gp*cp*tp*tp*c)-3'
- Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3wttA (A:)
gelvrtdspnflcsvlpthwrcnktlpiafkvvakgdvpdgtlvtvmagndenysaelrn
ataamknqvarfndlrfvgrsgrgksftltitvftnppqvatyhraikitvdgpreprrh
rqklddqtkpgslsfserlseleqlrrtamrvsphhpaptpnpraslnhstafnpqpqsq
mqdarqiqpsppwsydqsyqylgs
Sequence, based on observed residues (ATOM records): (download)
>3wttA (A:)
gelvrtdspnflcsvlpthwrcnktlpiafkvvakgdvpdgtlvtvmagndenysaelrn
ataamknqvarfndlrfvgrsgrgksftltitvftnppqvatyhraikitvdgpreprr
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3wttB (B:)
mprvvpdqrskfeneeffrklsreceikytgfrdrpheerqtrfqnacrdgrseiafvat
gtnlslqffpaswqgeqrqtpsreyvdlereagkvylkapmilngvcviwkgwidlhrld
gmgclefdeeraqqedalaqqa
Sequence, based on observed residues (ATOM records): (download)
>3wttB (B:)
prvvpdqrskfeneeffrklsreceikytgfrdrpheerqtrfqnacrdgrseiafvatg
tnlslqffpatpsreyvdlereagkvylkapmilngvcviwkgwidlhrldgmgclefde
eraqqedalaq
- Chain 'C':
Sequence, based on SEQRES records: (download)
>3wttC (C:)
slqrvpsydsfdsedypaalpnhkpkgtfkdyvrdradlnkdkpvipaaalagytgsgpi
qlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyeklsrglry
yydkniihktagkryvyrfvcdlqsllgytpeelhamldvkpdade
Sequence, based on observed residues (ATOM records): (download)
>3wttC (C:)
pvipaaalagytgsgpiqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkr
knkpkmnyeklsrglryyydkniihktagkryvyrfvcdlqsllgytpeelhamldvk
- Chain 'D':
No sequence available.
- Chain 'E':
No sequence available.
- Chain 'F':
Sequence, based on SEQRES records: (download)
>3wttF (F:)
gelvrtdspnflcsvlpthwrcnktlpiafkvvakgdvpdgtlvtvmagndenysaelrn
ataamknqvarfndlrfvgrsgrgksftltitvftnppqvatyhraikitvdgpreprrh
rqklddqtkpgslsfserlseleqlrrtamrvsphhpaptpnpraslnhstafnpqpqsq
mqdarqiqpsppwsydqsyqylgs
Sequence, based on observed residues (ATOM records): (download)
>3wttF (F:)
gelvrtdspnflcsvlpthwrcnktlpiafkvvakgdvpdgtlvtvmagndenysaelrn
ataamknqvarfndlrfvgrsgrgksftltitvftnppqvatyhraikitvdgprepr
- Chain 'G':
Sequence, based on SEQRES records: (download)
>3wttG (G:)
mprvvpdqrskfeneeffrklsreceikytgfrdrpheerqtrfqnacrdgrseiafvat
gtnlslqffpaswqgeqrqtpsreyvdlereagkvylkapmilngvcviwkgwidlhrld
gmgclefdeeraqqedalaqqa
Sequence, based on observed residues (ATOM records): (download)
>3wttG (G:)
prvvpdqrskfeneeffrklsreceikytgfrdrpheerqtrfqnacrdgrseiafvatg
tnlslqffpapsreyvdlereagkvylkapmilngvcviwkgwidlhrldgmgclefdee
raqqedalaq
- Chain 'H':
No sequence available.
- Chain 'I':
No sequence available.
- Chain 'J':
No sequence available.